The forest buffalo Syncerus caffer nanus is one of the three subspecies of African buffalo inhabiting the rainforests of Western and Central Africa. Because of its secretive behaviour and main habitat (dense rainforests), there is little quantitative information on the habitat preferences of this buffalo. We present here the first data on the frequencies of this species along a habitat gradient ranging from clearings and rivers to forests, as well as the characteristics of the buffalo's resting places. We recorded information from a buffalo herd during the period January 2002-January 2004 in the Bai-Hokou area (Dzanga-Ndoki National Park, Central African Republic). Resting places were firstly compared with available habitat (i.e. resting vs. random sites) and, successively, comparisons were made between diurnal versus nocturnal and wet versus dry season resting places. Forest buffalos were found to be highly dependent on clearings, as well as on the more open forest stands, characterized by large trees and open canopy. Such preferences could be due to the tendency of the buffalos to rest all together; open patches are likely to facilitate social interactions between the members of the herd.

The forest buffalo (Syncerus caffer nanus) typically inhabits the dense rain forests of western and central Africa.We recorded the 1st data on the behavior and social interactions of forest buffalo in natural forest clearings that represent crucial places in the rain forest for feeding and social interactions among individuals. Data were collected from a buffalo herd during January 2002-January 2004 in the Bai-Hokou study area (Dzanga-Ndoki National Park, Central African Republic). We analyzed typical behaviors (i.e., grazing, resting or ruminating, and moving) of both the herd and individuals (from 16 to 24 buffalos), as well as the most frequent social interactions. Spatial distribution among buffalos in the herd, related to both distance from forest edge and to the season (wet versus dry seasons), showed that the adult male was commonly closer to the females than to juveniles. Individuals were generally further away from each other when in the vicinity of the forest edge. Moreover, at greater distances from the forest edge, the number of buffalos in the herd increased. During the wet season, the herd was generally smaller and individuals were more spread out within the same clearing. The most common behavior of the male, females, and juveniles was resting or ruminating. Behavioral interactions by adults were mainly addressed to juveniles.

BackgroundAfrican wildlife experienced a reduction in population size and geographical distribution over the last millennium, particularly since the 19th century as a result of human demographic expansion, wildlife overexploitation, habitat degradation and cattle-borne diseases. In many areas, ungulate populations are now largely confined within a network of loosely connected protected areas. These metapopulations face gene flow restriction and run the risk of genetic diversity erosion. In this context, we assessed the “genetic health” of free ranging southern African Cape buffalo populations (S.c. caffer) and investigated the origins of their current genetic structure. The analyses were based on 264 samples from 6 southern African countries that were genotyped for 14 autosomal and 3 Y-chromosomal microsatellites.ResultsThe analyses differentiated three significant genetic clusters, hereafter referred to as Northern (N), Central (C) and Southern (S) clusters. The results suggest that splitting of the N and C clusters occurred around 6000 to 8400 years ago. Both N and C clusters displayed high genetic diversity (mean allelic richness (Ar) of 7.217, average genetic diversity over loci of 0.594, mean private alleles (Pa) of 11), low differentiation, and an absence of an inbreeding depression signal (mean FIS = 0.037). The third (S) cluster, a tiny population enclosed within a small isolated protected area, likely originated from a more recent isolation and experienced genetic drift (FIS = 0.062, mean Ar = 6.160, Pa = 2). This study also highlighted the impact of translocations between clusters on the genetic structure of several African buffalo populations. Lower differentiation estimates were observed between C and N sampling localities that experienced translocation over the last century.ConclusionsWe showed that the current genetic structure of southern African Cape buffalo populations results from both ancient and recent processes. The splitting time of N and C clusters suggests that the current pattern results from human-induced factors and/or from the aridification process that occurred during the Holocene period. The more recent S cluster genetic drift probably results of processes that occurred over the last centuries (habitat fragmentation, diseases). Management practices of African buffalo populations should consider the micro-evolutionary changes highlighted in the present study.Electronic supplementary materialThe online version of this article (doi:10.1186/s12862-014-0203-2) contains supplementary material, which is available to authorized users.

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The African lion (Panthera leo), listed as a vulnerable species on the IUCN Red List of Threatened Species (Appendix II of CITES), is mainly impacted by indiscriminate killing and prey base depletion. Additionally, habitat loss by land degradation and conversion has led to the isolation of some subpopulations, potentially decreasing gene flow and increasing inbreeding depression risks. Genetic drift resulting from weakened connectivity between strongholds can affect the genetic health of the species. In the present study, we investigated the evolutionary history of the species at different spatiotemporal scales. Therefore, the mitochondrial cytochrome b gene (N = 128), 11 microsatellites (N = 103) and 9,103 SNPs (N = 66) were investigated in the present study, including a large sampling from Tanzania, which hosts the largest lion population among all African lion range countries. Our results add support that the species is structured into two lineages at the continental scale (West-Central vs East-Southern), underlining the importance of reviewing the taxonomic status of the African lion. Moreover, SNPs led to the identification of three lion clusters in Tanzania, whose geographical distributions are in the northern, southern and western regions. Furthermore, Tanzanian lion populations were shown to display good levels of genetic diversity with limited signs of inbreeding. However, their population sizes seem to have gradually decreased in recent decades. The highlighted Tanzanian African lion population genetic differentiation appears to have resulted from the combined effects of anthropogenic pressure and environmental/climatic factors, as further discussed.