1. Concern about climate change and energy security is stimulating land-use change, which in turn precipitates social, economic and environmental responses. It is predicted that within 20 years in the UK, bioenergy crops could occupy significant areas of rural land. Among these, dedicated biomass crops, such as Miscanthus ( Miscanthus spp.) grass and short rotation willow ( Salix spp.) coppice, differ significantly from arable crops in their growth characteristics and management. It is important that the potential impacts of these differences are assessed before large-scale, long-term planting occurs. 2. We used a Sustainability Appraisal Framework (SAF) approach to landscape planning in the UK to identify stakeholder aspirations (objectives) and associated criteria (indicators) for the planting of dedicated biomass crops. 3. The use of environmental and physical constraints mapping allowed the SAF to focus only on environmentally-acceptable locations, thereby avoiding unsustainable trade-offs. The mapping identified 3·1 million ha of land in England as suitable for planting, suggesting the UK government target of 1·1 million ha by 2020 is feasible. 4. Evaluation of the SAF identified that while biodiversity was of concern to stakeholders, some current indicators of biodiversity are not appropriate. Butterfly abundance proved the most appropriate indicator, and it was found that total abundance was greater in field margins of both willow and Miscanthus biomass crops than in arable field margins. 5. Synthesis and applications. The potential conflicts of assuring food security, water availability, energy security and biodiversity conservation are recognized as a key challenge by governments worldwide. Methods with which decision-makers can compare the performance of different land-use scenarios against sustainability objectives will be crucial for achieving optimized and sustainable use of land-based resources to meet all four challenges. Using biomass crops planting as an example, this work illustrates the potential of a Sustainability Appraisal Framework, subject to identification and agreement of appropriate indicators, in securing a holistic understanding of the wide-ranging implications of large-scale, long-term changes to rural land-use in the wider context of sustainable land-use planning per se .

Poplars (genus Populus) and willows (genus Salix) are members of the Salicaceae, a family of catkinbearing trees, shrubs and sub-shrubs. Poplar is considered the model system for biological studies in trees and considerable genetic and genomic resources have become available in recent years. The transfer of information to research studies in willow, for which fewer resources are currently available, would be highly beneficial. However, the extent of conservation between poplar and willow genomes has not yet been extensively studied. To address this, we have constructed a linkage map of willow based on a large mapping population derived from a cross between two Salix viminalis × (S. viminalis × S. schwerinii) hybrid sibs, and aligned this to the publicly available poplar genome sequence. A set of genome-wide, expressed poplar sequences was selected and used to design primer sets that efficiently amplified homeologous regions in willow. Direct sequencing of the willow products confirmed homology with the poplar target in the majority of instances and allowed identification of single nucleotide polymorphisms (SNPs) that were used to map these loci. In total, 202 amplified fragment length polymorphisms (AFLPs), 75 microsatellites and 79 SNPs were used to construct a willow consensus map that spanned 1,856.7 cM with an average interval between markers of 6.3 cM. Poplar sequences homologous to those of the mapped willow microsatellite loci were identified and used in addition to the SNP markers to putatively align all but two minor linkage groups to the poplar genome sequence. A high degree of macrosynteny was revealed.

We compared birds in a group of established and well-managed miscanthus (Miscanthus x giganteus) fields in Somerset and East Devon, southwestern England, with plots of short rotation coppice (SRC) willow, arable crops and grassland in two winters and one summer. Following early spring cutting, 19 miscanthus fields grew taller, initially produced greater cover and were less weedy than SRC. As stubble in May, the miscanthus contained broadly similar species at similar densities to arable and grassland comparison plots. By July, at 2-m-tall, miscanthus held higher densities of birds but of fewer species, most of them characteristic of woodland and scrub. SRC, previously identified as being a beneficial crop for many birds, always contained more species and individuals than miscanthus. Throughout each of two winters, 15 miscanthus plots remained unharvested and contained more wood ⁄ scrub species such as Blackbirds Turdus merula, tits, Reed Buntings Emberiza schoeniclus and Woodcock Scolopax rusticola than the comparison plots, which held more corvids and Skylarks Alauda arvensis amongst others. Similar overall mean densities of birds in the miscanthus and the comparison plots masked relatively low density variance in miscanthus and very high variance in the comparison plots. Unharvested miscanthus crops grown in place of habitat types supporting flocks of wintering birds would displace these flocks. Miscanthus plantations with open patches attracted more finches and waders in winter. The two previous studies of birds in miscanthus in the UK found more species and more individuals than we did in summer and winter. Both these studies documented high levels of weediness and patchy crop growth. In the context of this previous work our data suggest that bird use of miscanthus in summer and winter is likely to be variable, affected by region, weediness, crop structure and patchiness. While large-scale cropping of SRC in England is likely to have a positive overall impact on a suite of common farmland and woodland birds, our data suggest that miscanthus in the southwest of England may have an approximately neutral effect.However, some open farmland specialist species may be lost when planting either crop.

Suggestions that novel, non‐food, dedicated biomass crops used to produce bioenergy may provide opportunities to diversify and reinstate biodiversity in intensively managed farmland have not yet been fully tested at the landscape scale. Using two of the largest, currently available landscape‐scale biodiversity data sets from arable and biomass bioenergy crops, we take a taxonomic and functional trait approach to quantify and contrast the consequences for biodiversity indicators of adopting dedicated biomass crops on land previously cultivated under annual, rotational arable cropping. The abundance and community compositions of biodiversity indicators in fields of break and cereal crops changed when planted with the dedicated biomass crops, miscanthus and short rotation coppiced (SRC) willow. Weed biomass was consistently greater in the two dedicated biomass crops than in cereals, and invertebrate abundance was similarly consistently higher than in break crops. Using canonical variates analysis, we identified distinct plant and invertebrate taxa and trait‐based communities in miscanthus and SRC willows, whereas break and cereal crops tended to form a single, composite community. Seedbanks were shown to reflect the longer term effects of crop management. Our study suggests that miscanthus and SRC willows, and the management associated with perennial cropping, would support significant amounts of biodiversity when compared with annual arable crops. We recommend the strategic planting of these perennial, dedicated biomass crops in arable farmland to increase landscape heterogeneity and enhance ecosystem function, and simultaneously work towards striking a balance between energy and food security.

The diamondback moth, Plutella xylostella, is a damaging pest of cruciferous crops, and has evolved resistance to many of the insecticides used for control, including members of the diamide class. Previous work on the molecular basis of resistance to diamides has documented mutations in the target-site, the ryanodine receptor, in resistant populations of P. xylostella worldwide. In contrast the role of metabolic resistance to this insecticide class is significantly less clear. Here we show that overexpression of a flavin-dependent monooxgenase (FMO) confers resistance to the diamide chlorantraniliprole in P. xylostella. Transcriptome profiling of diamide resistant strains, with and without target-site resistance, revealed constitutive over-expression of several transcripts encoding detoxification enzymes compared to susceptible strains. Two of these, CYP6BG1, and PxFMO2 were particularly highly overexpressed (33,000 and 14,700-fold, respectively) in a resistant strain (HAW) lacking target-site resistance. After 17 generations without diamide selection the resistance of the HAW strain fell by 52-fold and the expression of PxFMO2 by > 1300-fold, however, the expression of CYP6BG1 declined by only 3-fold. Generation of transgenic Drosophila melanogaster expressing these genes demonstrated that PxFMO2, but not CYP6BG1, confers resistance in vivo. Overexpression of PxFMO2 in the HAW strain is associated with mutations, including a putative transposable element insertion, in the promoter of this gene. These enhance the expression of a reporter gene when expressed in a lepidopteran cell line suggesting they are, at least in part, responsible for the overexpression of PxFMO2 in the resistant strain. Our results provide new evidence that insect FMOs can be recruited to provide resistance to synthetic insecticides.