Summary1. It is natural to regard most animal movement as a continuous-time process, generally observed at discrete times. Most existing statistical methods for movement data ignore this; the remainder mostly use discrete-time approximations, the statistical properties of which have not been widely studied, or are limited to special cases. We aim to facilitate wider use of continuous-time modelling for realistic problems. 2. We develop novel methodology which allows exact Bayesian statistical analysis for a rich class of movement models with behavioural switching in continuous time, without any need for time discretization error. We represent the times of changes in behaviour as forming a thinned Poisson process, allowing exact simulation and Markov chain Monte Carlo inference. The methodology applies to data that are regular or irregular in time, with or without missing values. 3. We apply these methods to GPS data from two animals, a fisher (Pekania [Martes] pennanti) and a wild boar (Sus scrofa), using models with both spatial and temporal heterogeneity. We are able to identify and describe differences in movement behaviour across habitats and over time. 4. Our methods allow exact fitting of realistically complex movement models, incorporating environmental information. They also provide an essential point of reference for evaluating other existing and future approximate methods for continuous-time inference.

Summary 1.Norway rat Rattus norvegicus populations are usually controlled with toxic baits, but this approach is increasingly recognized as having negative welfare and environmental impacts. An integrated strategy that relies less on rodenticides is therefore required. Here we investigate the possibility of using a resource-based approach to rat population management. 2. Structurally complex habitats provide rat populations with nest sites and opportunities to avoid predators; modifying habitats to reduce structural complexity might reduce their potential to support rat populations. As part of an integrated approach, this could be more sustainable than relying exclusively on lethal control. However, in order to target habitat management efforts most effectively with minimum impact on other species, an understanding of habitat utilization by Norway rats is required. 3. In this study, rat populations on farms in the north-east of England were monitored by radiotracking and population counts before and after a single phase of habitat modification. Rats living near farm buildings utilized areas with high levels of cover; habitat modification reduced the survival rate and size of these rat populations. Rats living in field margins also preferred areas with high levels of cover, but they had significantly bigger home ranges than rats living near farm buildings and were largely unaffected by small-scale habitat management. 4. Synthesis and applications . Our results indicate that habitat management near farm buildings has the potential to reduce the size of rat populations. As part of an integrated approach, this technique offers a way of reducing reliance on rodenticides. Habitat use by rats within the wider farm landscape suggests that land management practices have the potential to influence the size and distribution of rat populations; many game-rearing practices and environmental policies designed to create habitats for 'desirable' farm wildlife, inadvertently create desirable habitats for rats.

PAIs based on number of wild boar trails and on camera trap data appear to be more sensitive to changes in population size than PAIs based on signs of rooting. For wild boar densities similar to those recorded in this study, nine camera traps per km are sufficient to estimate the mean density of wild boar. © 2017 Crown copyright. Pest Management Science © 2017 Society of Chemical Industry.

Salmonella is the second most commonly reported zoonotic gastrointestinal pathogen in the European Union, and a significant proportion of the cases are linked to the consumption of contaminated pork. Reduction of Salmonella at the farm level helps to mininimise the contamination pressure at the slaughterhouse, and therefore the number of Salmonella bacteria entering the food chain. Cleaning and disinfection (C&D) between batches of pigs is an intervention measure that has potential to reduce the transmission of Salmonella contamination within farms. In this study, two pig finisher buildings in each of 10 Salmonella positive farms were sampled pre-C&D, post-C&D, post-restocking with the following batch of pigs, and shortly before these pigs were sent to slaughter. The incoming batch of pigs was also sampled before it reached the study building (pre-restocking). At each visit, pooled and individual faecal samples were collected and Salmonella isolation was carried out according to an ISO 6579:2002 Annex D-based method. One building on each farm (intervention) was cleaned and disinfected according to a rigorous protocol consisting of several steps and a Defra-approved disinfectant used at the General Orders concentration, whilst the other building (control) was cleaned and disinfected as per normal farm routine. At the post-C&D visit, Enterobacteriaceae and total bacterial counts were determined to evaluate residual faecal contamination and general hygiene levels. Rodent specialists visited the farms before and after C&D and rodent carcasses were collected for Salmonella testing. The intervention buildings were significantly less likely (p = 0.004) to be positive for Salmonella after C&D. The pre-restocking pigs had the highest likelihood (p<0.001) of being Salmonella positive (often with multiple serovars) and there was no significant difference between intervention and control buildings in Salmonella prevalence at the post-restocking visit (p = 0.199). However, the pigs housed in the intervention buildings were significantly less likely (p = 0.004) to be positive for Salmonella at slaughter age. Multivariable analysis suggested that cleaning all fixtures of buildings, leaving the pens empty for 2–3 days and using an effective disinfectant are factors significantly improving the likelihood of removing Salmonella contamination during C&D. Signs of rodents were recorded in all farms, but rodent activity and harbourage availability decreased between visits. All the rats tested were Salmonella negative. S. Typhimurium or its monophasic variants were isolated from 6 mouse carcasses in 3 farms where the same serovars were isolated from pigs. This study demonstrates that an appropriate C&D programme significantly reduces the likelihood of residual contamination in Salmonella positive pig buildings, and suggests a significant reduction in the prevalence of Salmonella in the pigs in appropriately cleaned and disinfected buildings when sampled before slaughter. Due to a high prevalence of infection in replacement pigs, contr...

Population trends for commensal rodents are the subject of interest and speculation but accurate data are rarely available. Here we report data from a 15-year systematic survey of rats and mice in English dwellings and present national-level estimates of prevalence for 1996–2010. We found evidence for peaks in prevalence of mice inside and rats around dwellings in 2002 and 2008. Models containing twelve variables relating to the dwelling and local area explained some but not all of the variation in prevalence. Older dwellings, those in rural areas, those with litter, drainage faults and pets or other animals outdoors tended to have higher levels of rodent prevalence. Regional differences were found but there were no seasonal trends apart from lower prevalence of mice during summer. Rodent prevalence was generally higher in rented (compared to owner-occupied) dwellings, although apparently not due to reduced tendency to carry out rodent control. The percentage of households having taken some form of action against active rodent problems varied according to prevalence at the national level, and therefore appropriate data on number of rodent control treatments carried out each year could likely act as a useful index of household rodent prevalence.