An electrospray-assisted laser desorption/ionization source with an infrared OPO laser (IR-ELDI) was constructed and optimized for peptide and protein mass spectrometry analysis. Similar to ELDI with an ultraviolet laser, IR-ELDI generates multiply charged molecules for peptides and proteins measured under ambient sampling conditions. Both samples in the dried state and analyte solutions can be directly measured by IR-ELDI without the presence of a conventional MALDI matrix. However, the analysis of sample solutions is shown to greatly enhance the sensitivity of the mass spectrometry measurement, as a 100-fold sensitivity gain for peptide measurements was measured. The limit of detection of IR-ELDI was determined to be 250 fmol for bradykinin (1.1 kDa), 100 fmol for ubiquitin (8.6 kDa), and 500 fmol for carbonic anhydrase (29 kDa). IR-ELDI is amenable for MS and MSn analysis for proteins up to 80 kDa transferrin. IR-ELDI-MS may be a useful tool for protein sequencing analysis from complex biological matrices, with minimal sample preparation required.
Protonated insulin molecules were formed by soft IR laser desorption ionization of a thin film of the protein
on a silicon surface. Time-of-flight mass spectra were recorded at wavelengths between 2.8 and 3.6 μm and
the efficiency of ionization was compared to the IR absorption of the protein thin film. Ionization efficiency
was quantified by recording the minimum laser energy per unit area required to produce a detectable ion
signal (threshold fluence). The ionization efficiency tracks the IR absorption spectrum of insulin between 2.6
and 3.8 μm in the region of OH, NH, and CH stretch absorption. The lowest threshold fluence and therefore
the most efficient ionization was nearly coincident with the OH stretch absorption of insulin near 3.0 μm. An
additional local maximum in ionization efficiency was observed at 3.4 μm, coincident with the CH stretch
vibrational absorption. Comparison of the ionization efficiency with the IR absorption indicates that the protein
and not the residual solvent is absorbing the laser energy. Scanning electron microscopy images of the bovine
insulin thin films on silicon after laser irradiation show melting and indications of explosive boiling. Ionization
occurs through the sacrifice of some of the protein molecules that absorb the laser energy and act as an
intrinsic matrix.
Infrared soft laser desorption/ionization was performed using a 2.94 µm Er : YAG laser and a commercial reflectron time-of-flight mass spectrometer. The instrument was modified so that a 337 nm nitrogen laser could be used concurrently with the IR laser to interrogate samples. Matrix-assisted laser desorption/ionization (MALDI), laser desorption/ionization and desorption/ionization on silicon with UV and IR lasers were compared. Various target materials were tested for IR soft desorption ionization, including stainless steel, aluminum, copper, silicon, porous silicon and polyethylene. Silicon surfaces gave the best performance in terms of signal level and low-mass interference. The internal energy resultant of the desorption/ionization was assessed using the easily fragmented vitamin B 12 molecule. IR ionization produced more analyte fragmentation than UV-MALDI analysis. Fragmentation from matrix-free IR desorption from silicon was comparable to that from IR-MALDI. The results are interpreted as soft laser desorption and ionization resulting from the absorption of the IR laser energy by the analyte and associated solvent molecules.
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