Two sequential year classes of Atlantic salmon parr, Salmo salar L., from 13 rivers throughout Ireland, genotyped at four widely used microsatellite loci, displayed comparable levels of intra-sample genetic variability to elsewhere in the species range. Temporal allele frequency differences were observed in only one riverine sample, whereas significant spatial differences were evident in all cases, with an overall F ST value of 0.03. These spatial differences imply a high degree of natal homing. Two tributaries of a single major river system displayed variability comparable with that within the entire study, suggesting that large rivers may contain several separate tributary populations. Isolation-by-distance analysis suggests the presence of regional structure, which may have been obscured by inclusion of samples from some smaller rivers in Donegal Bay in the north west that are probably affected by incursions of cultured salmon from a nearby ranching operation. Although limited by the small number of loci screened, individual assignment analysis gave levels of self-assignment which would suggest that mixed stock analysis would be feasible as a management tool in Irish salmon fisheries, given the inclusion of larger numbers of microsatellite loci and more extensive coverage of salmon producing rivers.
Locomotion of the box jellyfish Chiropsalmus sp. (cf quadrigatus)1 (Haeckel) and Chironex fleckeri (Southcott) was analysed using digital video. Specimens of Chiropsalmus sp. and C. fleckeri were collected in 2001 and 2002, respectively, from coastal waters of Northern Queensland, Australia. Chiropsalmus sp. animals were videoed swimming in an aquarium, and C. fleckeri in a large outdoor tank. Locomotor sequences of nine Chiropsalmus sp. and seven C. fleckeri individuals were analysed using video techniques. A subset of animals had fluorescent dye injected into the sub-umbrellar cavity, to allow observation of water movements during ejection from the bell. Both species used an intermittent style of jet propulsion similar to that documented for some other species of cubozoan medusae. Computer analysis allowed examination of positions of bell parts over time intervals (0.04 s) by comparing coordinates of nodes marked on various bell parts using imaging software. Examination of node coordinates allowed a detailed qualitative description of gait, in addition to quantitative statistical analyses. General linear modelling showed that interspecific differences in locomotion were explicable in terms of body size. Larger animals of both species tended to swim faster, and with a lower pulse frequency, than smaller individuals. Smaller animals also tended to swim faster relative to their bell diameter.
Microsatellite DNA loci, when used in population genetic studies, are usually assumed to be neutral (unaffected by natural selection, either directly or as a result of tight linkage), but this assumption is rarely tested. Here, the assumption of neutrality is examined using established methods, principally that based on the expected relationship between F ST and heterozygosity, at 12 putative neutral microsatellite loci utilised in a study of Atlantic herring Clupea harengus in the north east Atlantic (west of Great Britain and around Ireland) and in the Baltic Sea. All but two of these loci demonstrate relationships that suggest that they may be regarded as neutral genetic markers. Of the other two loci, however, one shows a relationship suggestive of the action of directional selection and the other of balancing natural selection, though other locusspecific effects may operate. Thus, the latter two loci may provide inaccurate inference if used in phylogeographic studies and also demonstrate the danger of assuming neutrality at all microsatellite loci without explicit testing. However, such loci, particularly those affected by directional as opposed to balancing selection, may be of great use in stock discrimination studies, and selected loci in general, have considerably potential in studies of adaptation.
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