A phylogenetic analysis on specimen level was made in possible support of a multivariate analysis of the Calamus javensis complex. Nine species, at some time recognized within the complex, and several recognisable forms were included. The phylogenetic markers used were the nuclear 5S spacer (5S nrDNA) and the chloroplast Maturase K (matK). The Bayesian analysis showed that only 5S provided some resolution. The 50 % majority rule consensus showed one major polytomy with a few supported groups, which were mainly morphologically unsupported pairs of specimens. However, one group, the form C. tenompokensis (the only distinct group in a multivariate analysis) is morphologically distinct and phylogenetically monophyletic and can be recognized as a species. Of all other recognizable forms, we only consider C. acuminatus to be regarded as a variety as it was not supported in the morphometric analysis.
Aims: Broussonetia papyrifera (Saeh plant) has many qualities, the inner bark was the material for 'dluwang' papers on which Indonesian historical manuscripts were written, and the leaves have bioactive constituents of medicinal value, and antifungal activities. We investigated the diversity of yeast species associated with leaves from 6 months and 1.5 yearold plants, which is prerequisite to understand the phylloplane yeasts and plant interaction.
Methodology and results:The yeasts were isolated from fresh leaves by washing and membrane filtration methods. A total of 16 leaf samples of 6 months and 1.5 year-old plants were collected from four locations in Java, Indonesia, and 2,543 yeast isolates were obtained. Based on similarity of colony morphology, 82 representative yeast isolates were selected and identified based on the sequence analyses of internal transcribed spacer (ITS) regions of rDNA. The identification result showed that they consisted of 17 genera and 32 species. Thirty six of representative yeast isolates belong to 11 genera (18 species) of the phylum Ascomycota and forty six isolates belong to 6 genera (14 species) of the phylum Basidiomycota. Phylogenetic trees showed that the yeast isolates are phylogenetically diverse and distributed in the phyla of Ascomycota (classes Saccharomycetales and Dothideomycetes) and Basidiomycota (classes Microbotryomycetes, Tremellomycetes, and Ustilaginomycetes). Conclusions, significance and impact of study: The phylloplane yeasts of B. papyrifera (Saeh plant) were taxonomically heterogeneous. This is the first report of the isolation and identification of phylloplane yeasts from B. papyrifera. Phylloplane yeasts may possess antagonistic activity to fungal plant pathogens in their natural habitats.
The problem of polymorphism in the Calamus javensis complex has been examined by various techniques in several publications. A wide range of morphological variation was identified during these studies. Characters showing high variation were leaf sheath and ocrea morphology, number and arrangement of leaflets, length and arrangement of the rachillas. All names used in the complex are here regarded as synonyms of C. javensis except C. tenompokensis, which is retained as a distinct species. One variety is recognized, C. javensis var. polyphyllus (including C. acuminatus). Using morphological characters, we recognized 11 informal (often not monophyletic) forms within C. javensis var. javensis. Here we present identification keys, descriptions and notes of all recognisable forms, varieties and species included in the Calamus javensis complex.
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