Biologically realistic computer simulations of neuronal circuits require systematic data-driven modeling of neuron type-specific synaptic activity. However, limited experimental yield, heterogeneous recordings conditions, and ambiguous neuronal identification have so far prevented the consistent characterization of synaptic signals for all connections of any neural system. We introduce a strategy to overcome these challenges and report a comprehensive synaptic quantification among all known neuron types of the hippocampal-entorhinal network. First, we reconstructed >2600 synaptic traces from ∼1200 publications into a unified computational representation of synaptic dynamics. We then trained a deep learning architecture with the resulting parameters, each annotated with detailed metadata such as recording method, solutions, and temperature. The model learned to predict the synaptic properties of all 3,120 circuit connections in arbitrary conditions with accuracy approaching the intrinsic experimental variability. Analysis of data normalized and completed with the deep learning model revealed that synaptic signals are controlled by few latent variables associated with specific molecular markers and interrelating conductance, decay time constant, and short-term plasticity. We freely release the tools and full dataset of unitary synaptic values in 32 covariate settings. Normalized synaptic data can be used in brain simulations, and to predict and test experimental hypothesis.
Heart rate variability (HRV) can be an important indicator of several conditions that affect the autonomic nervous system, including traumatic brain injury, post-traumatic stress disorder and peripheral neuropathy [3], [4], [10] & [11]. Recent work has shown that some of the HRV features can potentially be used for distinguishing a subject's normal mental state from a stressed one [4], [13] & [14]. In all of these past works, although processing is done in both frequency and time domains, few classification algorithms have been explored for classifying normal from stressed RRintervals. In this paper we used 30 s intervals from the Electrocardiogram (ECG) time series collected during normal and stressed conditions, produced by means of a modified version of the Trier social stress test, to compute HRV-driven features and subsequently applied a set of classification algorithms to distinguish stressed from normal conditions. To classify RR-intervals, we explored classification algorithms that are commonly used for medical applications, namely 1) logistic regression (LR) [16] and 2) linear discriminant analysis (LDA) [6]. Classification performance for various levels of stress over the entire test was quantified using precision, accuracy, sensitivity and specificity measures. Results from both classifiers were then compared to find an optimal classifier and HRV features for stress detection. This work, performed under an IRB-approved protocol, not only provides a method for developing models and classifiers based on human data, but also provides a foundation for a stress indicator tool based on HRV. Further, these classification tools will not only benefit many civilian applications for detecting stress, but also security and military applications for screening such as: border patrol, stress detection for deception [3], [17], and wounded-warrior triage [12].
The human cardiovascular system, controlled by the autonomic nervous system (ANS), is one of the first sites where one can see the "fight-or-flight" response due to the presence of external stressors. In this paper, we investigate the possibility of detecting mental stress using a novel measure that can be measured in a contactless manner: Pulse transit time (dPTT), which refers to the time that is required for the blood wave (BW) to cover the distance from the heart to a defined remote location in the body. Loosely related to blood pressure, PTT is a measure of blood velocity, and is also implicated in the "fight-or-flight" response. We define the differential PTT (dPTT) as the difference in PTT between two remote areas of the body, such as the forehead and the palm. Expanding our previous work on remote BW detection from visible spectrum videos, we built a system that remotely measures dPTT. Human subject data were collected under an IRB approved protocol from 15 subjects both under normal and stress states and are used to initially establish the potential use of remote dPPT detection as a stress indicator.
While recent advances have shown that it is possible to acquire a signal equivalent to the heartbeat from visual spectrum video recordings of the human skin, extracting the heartbeat's exact timing information from it, for the purpose of heart rate variability analysis, remains a challenge. In this paper, we explore two novel methods to estimate the remote cardiac signal peak positions, aiming at a close representation of the R-peaks of the ECG signal. The first method is based on curve fitting (CF) using a modified filtered least mean square (LMS) optimization and the second method is based on system estimation using blind deconvolution (BDC). To prove the efficacy of the developed algorithms, we compared results obtained with the ground truth (ECG) signal. Both methods achieved a low relative error between the peaks of the two signals. This work, performed under an IRB approved protocol, provides initial proof that blind deconvolution techniques can be used to estimate timing information of the cardiac signal closely correlated to the one obtained by traditional ECG. The results show promise for further development of a remote sensing of cardiac signals for the purpose of remote vital sign and stress detection for medical, security, military and civilian applications.
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