The COP9 (Constitutive photomorphogenesis 9) signalosome (CSN), a large multiprotein complex that resembles the 19S lid of the 26S proteasome, plays a central role in the regulation of the E3-cullin RING ubiquitin ligases (CRLs). The catalytic activity of the CSN complex, carried by subunit 5 (CSN5/Jab1), resides in the deneddylation of the CRLs that is the hydrolysis of the cullin-neural precursor cell expressed developmentally downregulated gene 8 (Nedd8)isopeptide bond. Whereas CSN-dependent CSN5 displays isopeptidase activity, it is intrinsically inactive in other physiologically relevant forms. Here we analyze the crystal structure of CSN5 in its catalytically inactive form to illuminate the molecular basis for its activation state. We show that CSN5 presents a catalytic domain that brings essential elements to understand its activity control. Although the CSN5 active site is catalytically competent and compatible with di-isopeptide binding, the Ins-1 segment obstructs access to its substrate-binding site, and structural rearrangements are necessary for the Nedd8-binding pocket formation. Detailed study of CSN5 by molecular dynamics unveils signs of flexibility and plasticity of the Ins-1 segment. These analyses led to the identification of a molecular trigger implicated in the active/inactive switch that is sufficient to impose on CSN5 an active isopeptidase state. We show that a single mutation in the Ins-1 segment restores biologically relevant deneddylase activity. This study presents detailed insights into CSN5 regulation. Additionally, a dynamic monomer-dimer equilibrium exists both in vitro and in vivo and may be functionally relevant.C ell signaling processes mediated by ubiquitinylation, the posttranslational covalent conjugation of ubiquitin molecules, are of prime importance for cellular activity and particularly for protein turnover. Ubiquitin-ligase enzymes (E3s) are responsible for the last step of the ubiquitinylation reaction, and the multisubunit cullin-RING E3 ubiquitin ligases (CRLs) represent the most prominent of E3 enzymes. Among the several factors that regulate CRL activity, cullin neddylation/deneddylation cycles are central (1).The Cop9 signalosome (CSN), which is an eight-subunit complex largely conserved through evolution, deneddylates CRLs and thereby regulates CRL activity. As a large number of proteins are ubiquitinylated by CRLs, the CSN complex is implicated in the control of a significant proportion of the proteome, including prooncogenes, tumor suppressors, and other important cellular protagonists (1). Not surprisingly, the CSN has been implicated in various cellular functions, ranging from cell cycles to circadian rhythm and to immunity in various organisms. Furthermore, many studies have found a strong link between the CSN and cancers (2).The CSN, a multi-protein complex of about 320 kDa, contains six proteasome Cop9 eIF3 (PCI)-based subunits and two MPR1-Pad1-N-terminal (MPN)-based subunits. The subunit 5 [CSN5; also known as c-Jun activation domain-binding protein-1 (...

Intrinsically disordered proteins (IDPs) have critical roles in a diverse array of cellular functions. Of relevance here is that they are components of macromolecular complexes, where their conformational flexibility helps mediate interactions with binding partners. IDPs often interact with their binding partners through short sequence motifs, commonly repeated within the disordered regions. As such, multivalent interactions are common for IDPs and their binding partners within macromolecular complexes. Here we discuss the importance of IDP multivalency in three very different macromolecular assemblies: biomolecular condensates, the nuclear pore, and the cytoskeleton.