Annual dynamics and ecological characteristics of the genus Dinophysis spp. and associated shellfish toxicity events were studied from 2001 to 2005 during monitoring fieldwork in the coastal waters of the eastern Adriatic Sea. Analysis of the seasonal occurrence of Dinophysis species identified D. acuminata and D. sacculus as typical spring species, D. caudata, D. fortii and D. rotundata as summer and late summer species and D. tripos as a winter species. The highest abundances occurred when there were large differences between surface and bottom temperatures and salinities. D. caudata, D. sacculus and D. rotundata abundances had significant relationships with Dt, while the highest abundances of D. acuta, D. fortii and D. tripos were associated with high Ds values. Much higher abundances of D. caudata and D. fortii in offshore compared to inshore waters of the northern Adriatic Sea and the significant inverse relationship of these species' abundances with salinity suggested the possibility of their transport by Italian river-influenced coastal waters towards the eastern Croatian coast during the summer season and under stratified conditions. Toxicity events occurred more frequently in the more eutrophicated northern Adriatic Sea than in the southern Adriatic Sea and mostly succeeded the rainfall periods. Diarrhetic shellfish poisoning (DSP) toxin profile analyses identified okadaic acid and yessotoxin as the main DSP toxins occurring in Croatian waters.

Evaluation of a 45-year data set of primary production (PP), a 30-year data set of phytoplankton biomass, and a 51-year data set of species composition shows an increase of phytoplankton biomass and abundance in the period from the mid-1980s to the mid-1990s. Phytoplankton biomass showed bimodal seasonal cycles, with winter and spring maxima, which did not change over the past 30 years. Diatoms were the most abundant functional group and they prevailed during the colder part of the year while the dinoflagellate contribution to the phytoplankton community increased in the warmer period from May to August. Diatoms showed a significant negative correlation with sea surface temperature (SST), while dinoflagellates were positively correlated with SST. An increase of phytoplankton abundance, particularly dinoflagellate, in the period from the mid-1980s to the mid-1990s coincided with years characterized by a high North Atlantic Oscillation (NAO) index. Primary production and chlorophyll a concentration in the spring period were negatively correlated with the NAO winter (DJFM) index, probably caused by increased precipitation associated with a low or negative NAO index. PP in winter during the mixing period was positively related to the NAO winter index associated with higher temperatures and dry conditions which brought more clear days and increased input of solar radiation.

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In September 2015, a massive occurrence of the Ostreopsis species was recorded in central Adriatic Kaštela Bay. In order to taxonomically identify the Ostreopsis species responsible for this event and determine their toxin profile, cells collected in seawater and from benthic macroalgae were analyzed. Conservative taxonomic methods (light microscopy and SEM) and molecular methods (PCR-based assay) allowed the identification of the species Ostreopsis cf. ovata associated with Coolia monotis. The abundance of O. cf. ovata reached 2.9 × 104 cells L−1 in seawater, while on macroalgae, it was estimated to be up to 2.67 × 106 cells g−1 of macroalgae fresh weight and 14.4 × 106 cells g−1 of macroalgae dry weight. An indirect sandwich immunoenzymatic assay (ELISA) and liquid chromatography–high-resolution mass spectrometry (LC-HRMS) were used to determine the toxin profile. The ELISA assay revealed the presence of 5.6 pg palytoxin (PLTX) equivalents per O. cf. ovata cell. LC-HRMS was used for further characterization of the toxin profile, which showed that there were 6.3 pg of the sum of ovatoxins (OVTXs) and isobaric PLTX per O. cf. ovata cell, with a prevalence of OVTXs (6.2 pg cell−1), while the isobaric PLTX concentration was very low (0.1 pg cell−1). Among OVTXs, the highest concentration was recorded for OVTX-a (3.6 pg cell−1), followed by OVTX-b (1.3 pg cell−1), OVTX-d (1.1 pg cell−1), and OVTX-c (0.2 pg cell−1).