Investigating historical anthropogenic impacts on faunal communities is key to understanding present patterns of biodiversity and holds important implications for conservation biology. While several studies have demonstrated the human role in the extinction of large herbivores, effective methods to study human interference on large carnivores in the past are limited by the small number of carnivoran remains in the paleozoological record. Here, we integrate a systematic paleozoological survey of biogenic cave assemblages with the archaeological and paleoenvironmental records of the Judean Desert, to reveal historical changes in the large carnivore community. Our results show a late Holocene (~ 3400 years ago) faunal reassembly characterized by the diminishment of the dominant large carnivoran, the Arabian leopard (Panthera pardus sbsp. nimr), and the spread of the Syrian striped hyena (Hyaena hyaena sbsp. syriaca). We suggest that increased hunting pressure in combination with regional aridification were responsible for the decrease in the number of leopards, while the introduction of domestic animals and settlement refuse brought new scavenging opportunities for hyenas. The recent extirpation of leopards from the region has been a final note to the Holocene human impact on the ecosystem.

Abstract

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Biotic interactions between Africa and Eurasia across the Levant have invoked particular attention among scientists aiming to unravel early human dispersals. However, it remains unclear whether behavioral capacities enabled early modern humans to surpass the Saharo–Arabian deserts or if climatic changes triggered punctuated dispersals out of Africa. Here, we report an unusual subfossil assemblage discovered in a Judean Desert’s cliff cave near the Dead Sea and dated to between ∼42,000 and at least 103,000 y ago. Paleogenomic and morphological comparisons indicate that the specimens belong to an extinct subspecies of the eastern African crested rat, Lophiomys imhausi maremortum subspecies nova, which diverged from the modern eastern African populations in the late Middle Pleistocene ∼226,000 to 165,000 y ago. The reported paleomitogenome is the oldest so far in the Levant, opening the door for future paleoDNA analyses in the region. Species distribution modeling points to the presence of continuous habitat corridors connecting eastern Africa with the Levant during the Last Interglacial ∼129,000 to 116,000 y ago, providing further evidence of the northern ingression of African biomes into Eurasia and reinforcing previous suggestions of the critical role of climate change in Late Pleistocene intercontinental biogeography. Furthermore, our study complements other paleoenvironmental proxies with local—instead of interregional—paleoenvironmental data, opening an unprecedented window into the Dead Sea rift paleolandscape.

Long temporal records of Holocene wild mammal communities are essential to examine the role of human impacts and climatic fluctuations in the configuration of modern ecosystems. We show that such records can be assembled through extensive radiocarbon dating of faunal remains obtained from biogenic cave deposits. We dated 110 mammalian remains from 19 different cave sites in the Judean Desert. We use the dates in combination with archaeological survey data and bone collagen/apatite δ 13 C values to study faunal succession in the context of Holocene climate change and human settlement history in the region. Our results suggest a change in the late Holocene, expressed in fewer observations of Arabian leopard (Panthera pardus nimr) and gazelle (Gazella spp.), and an increase of Syrian striped hyena (Hyaena hyaena syriaca), fox (Vulpes spp.), Nubian ibex (Capra nubiana) and rock hyrax (Procavia capensis); suids (Sus scrofa) appear for the first time. According to the data distribution, however, the probability of finding a bone diminishes exponentially with time, which implies that the Judean Desert cave paleozoological record is temporally biased. The weight of evidence ultimately favors an explanation of the observed patterns as the consequence of a combined anthropogenic and climatic impact on local food webs.