Context. The members of the η Chamaleontis cluster are in an evolutionary stage in which disks are rapidly evolving. It also exhibits some peculiarities, such as the large fraction of binaries and accretion disks, probably related to the cluster formation process. Its proximity makes this stellar group an ideal target for studying the relation between X-ray emission and those stellar parameters. Aims. Our main objective is to determine the general X-ray properties of the cluster members in terms of coronal temperature, column density, emission measure, X-ray luminosity, and variability. We also aim to establish the relation between the X-ray luminosity of these stars and other stellar parameters, such as effective temperature, binarity, and the presence of accretion disks. Finally, a study of flare energies in each flare event detected during the observations and their relation with some stellar parameters is also performed. Methods. We used proprietary data from a deep XMM-Newton EPIC observation targeting the core of the η Chamaleontis cluster. Specific software for the reduction of XMM-Newton data was used to analyze our observation. To detect sources in the composed EPIC pn+mos image, we used the wavelet-based code PWDetect. General coronal properties were derived from plasma model fitting. X-ray light curves in the 0.3−8.0 keV energy range were generated for each star. Results. We determine both the coronal properties and variability of the η Chamaleontis members in the XMM-Newton EPIC field-ofview. A total of six flare-like events are clearly detected in five different stars. For them, we derived coronal properties during the flare events and pseudo-quiescent state separately. In our observations, stars that experienced a flare event have higher X-ray luminosities in the pseudo-quiescent state than cluster members of similar spectral type that exhibit no evidence of flaring independently of whether they have an accretion disk or not. Observed flare energies are typical of both pre-main-and main-sequence M stars. We detected no difference between flare energies of stars with and without an accretion disk.
The results demonstrated the important role of the CYP 3A4*1B allelic variant as risk factor for developing drug resistance and CYP2D6, CYP2C19 SNPs and haplotypes may affect the response to antiepileptic drugs.
The development of the HUPO-PSI's (Proteomics Standards Initiative) standard data formats and MIAPE (Minimum Information About a Proteomics Experiment) guidelines should improve proteomics data sharing within the scientific community. Proteomics journals have encouraged the use of these standards and guidelines to improve the quality of experimental reporting and ease the evaluation and publication of manuscripts. However, there is an evident lack of bioinformatics tools specifically designed to create and edit standard file formats and reports, or embed them within proteomics workflows. In this article, we describe a new web-based software suite (The ProteoRed MIAPE web toolkit) that performs several complementary roles related to proteomic data standards. First, it can verify that the reports fulfill the minimum information requirements of the corresponding MIAPE modules, highlighting inconsistencies or missing information. Second, the toolkit can convert several XMLbased data standards directly into human readable MIAPE reports stored within the ProteoRed MIAPE repository. Finally, it can also perform the reverse operation, allowing users to export from MIAPE reports into XML files for computational processing, data sharing, or public database submission. The toolkit is thus the first application capable of automatically linking the PSI's MIAPE modules with the corresponding XML data exchange standards, enabling bidirectional conversions. This toolkit is freely available at
indirect tax harmonization, origin principle,
Although the Pgp efflux transport protein is overexpressed in resected tissue of patients with epilepsy, the presence of polymorphisms in MDR1/ABCB1 and MRP2/ABCC2 in patients with antiepileptic-drugs resistant epilepsy (ADR) is controversial. The aim of this study was to perform an exploratory study to identify nucleotide changes and search new and reported mutations in patients with ADR and patients with good response (CTR) to antiepileptic drugs (AEDs) in a rigorously selected population. We analyzed 22 samples In Material and Methods, from drug-resistant patients with epilepsy and 7 samples from patients with good response to AEDs. Genomic DNA was obtained from leukocytes. Eleven exons in both genes were genotyped. The concentration of drugs in saliva and plasma was determined. The concentration of valproic acid in saliva was lower in ADR than in CRT. In ABCB1, five reported SNPs and five unreported nucleotide changes were identified; rs2229109 (GA) and rs2032582 (AT and AG) were found only in the ADR. Of six SNPs associated with the ABCC2 that were found in the study population, rs3740066 (TT) and 66744T > A (TG) were found only in the ADR. The strongest risk factor in the ABCB1 gene was identified as the TA genotype of rs2032582, whereas for the ABCC2 gene the strongest risk factor was the T allele of rs3740066. The screening of SNPs in ACBC1 and ABCC2 indicates that the Mexican patients with epilepsy in this study display frequently reported ABCC1 polymorphisms; however, in the study subjects with a higher risk factor for drug resistance, new nucleotide changes were found in the ABCC2 gene. Thus, the population of Mexican patients with AED-resistant epilepsy (ADR) used in this study exhibits genetic variability with respect to those reported in other study populations; however, it is necessary to explore this polymorphism in a larger population of patients with ADR.
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