Patches formed by dense accumulations of diatoms in the surf zone (surf diatoms) are common on sandy beaches with intermediate to dissipative morphodynamic states. Their appearances are correlated with environmental factors such as the passage of cold fronts when onshore winds increase beach hydrodynamics, resuspending epibenthic stocks and accumulating them through the inner surf zone. In Santa Catarina state, Southern Brazil, two beaches are known to have frequent occurrence of accumulations of the surf diatom Asterionellopsis glacialis sensu lato: Rincão Beach (28°50' S) and Navegantes Beach (26°52' S). The high biomass of this alga and its central importance in the trophic structure of the coastal ecosystems suggest studies about its potential applications. In the present study, strains of A. glacialis were isolated, cultured under different conditions and evaluated for ecophysiological aspects: growth rate under different conditions, potential biological activities of exudates, biomass and lipid content, and fatty acid profile. A. glacialis cells in culture showed deformation, which were ameliorated by using agitation and silicon and phosphorus enriched culture media. Exudates of the strains showed no allelopathic effects, although previous studies have indicated activity. Lipid content showed variation depending on the strain and culture media. Values ranged from 9% to 13.6% by dry weight. In all strains saturated fatty acids and polyunsaturated fatty acids were identified. Some hypotheses were proposed to explain the variation of the lipid contents, fatty acid profiles and physiological features between strains of the same species. We believe that the fatty acids profile of this primary producer has important consequences in the sandy beach ecology.