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A new approach to determining sampling effort for analyzing biofilm-dwelling ciliate colonization was studied in the coastal waters of the Yellow Sea, northern China, from May to June 2010. The optimal sample size for evaluating biofilm-dwelling ciliate colonization increased with shortening exposure time, and can be determined according to the probability of recovering those species with a specified cumulative contribution to communities. More slide-replicates were required at a depth of 3 m than at 1 m to recover equivalent proportions of the ciliate communities. For routine colonization dynamics analyses, 10 slide-replicates (175 cm(2)) were sufficient to achieve a 95% probability of recovering those species with a cumulative contribution of >90% to the ciliate communities at a depth of 1 m. These results suggest that 10 slide-replicates immersed at a depth of 1 m may be an optimal sampling strategy for analyzing the colonization dynamics of biofilm-dwelling ciliate communities in marine habitats.

Colonization dynamics of periphytic ciliate communities were studied in coastal waters of the Yellow Sea, northern China from May to June 2010, using an artificial substratum. Samples were collected at two depths of 1 and 3 m. The temporal patterns of ciliate colonization had similar dynamics and were fitted to the MacArthur–Wilson and logistic models in colonization and growth curves at both depths, respectively. The ciliate communities reached equilibrium in species composition within at least 10-days exposure time. However, they differed in both structural and functional parameters between the two layers, despite similar species composition. The species diversity, evenness, the colonization rate (G) and maximum abundance (Amax) were distinctly higher, but the time for reaching 90% equilibrium species number (T90%) was shorter at the depth of 1 m than those at a deeper layer. Results suggest that it is an optimal strategy to collect the ciliate communities within shorter exposure time at 1 m for ecological research and a monitoring programme in marine ecosystems.

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These results suggest that sampling sizes represented a significant influence on biodiversity analysis of microperiphyton communities for monitoring programs and ecological conservation researches in marine ecosystems.