Abstract. Discovery of association rules is an important data mining task. Several parallel and sequential algorithms have been proposed in the literature to solve this problem. Almost all of these algorithms make repeated passes over the database to determine the set of frequent itemsets (a subset of database items), thus incurring high I/O overhead. In the parallel case, most algorithms perform a sum-reduction at the end of each pass to construct the global counts, also incurring high synchronization cost.In this paper we describe new parallel association mining algorithms. The algorithms use novel itemset clustering techniques to approximate the set of potentially maximal frequent itemsets. Once this set has been identified, the algorithms make use of efficient traversal techniques to generate the frequent itemsets contained in each cluster. We propose two clustering schemes based on equivalence classes and maximal hypergraph cliques, and study two lattice traversal techniques based on bottom-up and hybrid search. We use a vertical database layout to cluster related transactions together. The database is also selectively replicated so that the portion of the database needed for the computation of associations is local to each processor. After the initial set-up phase, the algorithms do not need any further communication or synchronization. The algorithms minimize I/O overheads by scanning the local database portion only twice. Once in the set-up phase, and once when processing the itemset clusters. Unlike previous parallel approaches, the algorithms use simple intersection operations to compute frequent itemsets and do not have to maintain or search complex hash structures.Our experimental testbed is a 32-processor DEC Alpha cluster inter-connected by the Memory Channel network. We present results on the performance of our algorithms on various databases, and compare it against a well known parallel algorithm. The best new algorithm outperforms it by an order of magnitude.
This paper studies the problem of building multiclass classifiers for tissue classification based on gene expression. The recent development of microarray technologies has enabled biologists to quantify gene expression of tens of thousands of genes in a single experiment. Biologists have begun collecting gene expression for a large number of samples. One of the urgent issues in the use of microarray data is to develop methods for characterizing samples based on their gene expression. The most basic step in the research direction is binary sample classification, which has been studied extensively over the past few years. This paper investigates the next step-multiclass classification of samples based on gene expression. The characteristics of expression data (e.g. large number of genes with small sample size) makes the classification problem more challenging. The process of building multiclass classifiers is divided into two components: (i) selection of the features (i.e. genes) to be used for training and testing and (ii) selection of the classification method. This paper compares various feature selection methods as well as various state-of-the-art classification methods on various multiclass gene expression datasets. Our study indicates that multiclass classification problem is much more difficult than the binary one for the gene expression datasets. The difficulty lies in the fact that the data are of high dimensionality and that the sample size is small. The classification accuracy appears to degrade very rapidly as the number of classes increases. In particular, the accuracy was very low regardless of the choices of the methods for large-class datasets (e.g. NCI60 and GCM). While increasing the number of samples is a plausible solution to the problem of accuracy degradation, it is important to develop algorithms that are able to analyze effectively multiple-class expression data for these special datasets.
Content-based music genre classification is a fundamental component of music information retrieval systems and has been gaining importance and enjoying a growing amount of attention with the emergence of digital music on the Internet. Currently little work has been done on automatic music genre classification, and in addition, the reported classification accuracies are relatively low. This paper proposes a new feature extraction method for music genre classification, DWCHs 1 . DWCHs capture the local and global information of music signals simultaneously by computing histograms on their Daubechies wavelet coefficients. Effectiveness of this new feature and of previously studied features are compared using various machine learning classification algorithms, including Support Vector Machines and Linear Discriminant Analysis. It is demonstrated that the use of DWCHs significantly improves the accuracy of music genre classification.
Entropy-type measures for the heterogeneity of clusters have been used for a long time. This paper studies the entropy-based criterion in clustering categorical data. It first shows that the entropy-based criterion can be derived in the formal framework of probabilistic clustering models and establishes the connection between the criterion and the approach based on dissimilarity coefficients. An iterative Monte-Carlo procedure is then presented to search for the partitions minimizing the criterion. Experiments are conducted to show the effectiveness of the proposed procedure.
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