CeOx hybrid nanoparticles were synthesized and evaluated for use as radical scavengers, in place of commercially available Ce(NO3)3 and CeO2 nanoparticles, to avoid deterioration of the initial electrochemical performance and/or spontaneous aggregation/precipitation issues encountered in polymer electrolyte membranes. When CeOx hybrid nanoparticles were used for membrane formation, the resulting membranes exhibited improved proton conductivity (improvement level = 2–15% at 30–90 °C), and thereby electrochemical single cell performance, because the –OH groups on the hybrid nanoparticles acted as proton conductors. In spite of a small amount (i.e., 1.7 mg/cm3) of introduction, their antioxidant effect was sufficient enough to alleviate the radical-induced decomposition of perfluorinated sulfonic acid ionomer under a Fenton test condition and to extend the chemical durability of the resulting reinforced membranes under fuel cell operating conditions.