We employ quantum Monte Carlo to obtain chemically accurate vertical and adiabatic excitation energies, and equilibrium excited-state structures for the small, yet challenging, formaldehyde and thioformaldehyde molecules. A key ingredient is a robust protocol to obtain balanced ground- and excited-state Jastrow–Slater wave functions at a given geometry, and to maintain such a balanced description as we relax the structure in the excited state. We use determinantal components generated via a selected configuration interaction scheme which targets the same second-order perturbation energy correction for all states of interest at different geometries, and fully optimize all variational parameters in the resultant Jastrow–Slater wave functions. Importantly, the excitation energies as well as the structural parameters in the ground and excited states are converged with very compact wave functions comprising few thousand determinants in a minimally augmented double-ζ basis set. These results are obtained already at the variational Monte Carlo level, the more accurate diffusion Monte Carlo method yielding only a small improvement in the adiabatic excitation energies. We find that matching Jastrow–Slater wave functions with similar variances can yield excitation energies compatible with our best estimates; however, the variance-matching procedure requires somewhat larger determinantal expansions to achieve the same accuracy, and it is less straightforward to adapt during structural optimization in the excited state.
We investigate the performance of a class of compact and systematically improvable Jastrow–Slater wave functions for the efficient and accurate computation of structural properties, where the determinantal component is expanded with a perturbatively selected configuration interaction scheme (CIPSI). We concurrently optimize the molecular ground-state geometry and full wave function—Jastrow factor, orbitals, and configuration interaction coefficients—in variational Monte Carlo (VMC) for the prototypical case of 1,3-trans-butadiene, a small yet theoretically challenging π-conjugated system. We find that the CIPSI selection outperforms the conventional scheme of correlating orbitals within active spaces chosen by chemical intuition: it gives significantly better variational and diffusion Monte Carlo energies for all but the smallest expansions, and much smoother convergence of the geometry with the number of determinants. In particular, the optimal bond lengths and bond-length alternation of butadiene are converged to better than 1 mÅ with just a few thousand determinants, to values very close to the corresponding CCSD(T) results. The combination of CIPSI expansion and VMC optimization represents an affordable tool for the determination of accurate ground-state geometries in quantum Monte Carlo.
The perturbatively selected configuration interaction scheme (CIPSI) is particularly effective in constructing determinantal expansions for quantum Monte Carlo (QMC) simulations with Jastrow−Slater wave functions: fast and smooth convergence of ground-state properties and balanced descriptions of ground and excited states of different symmetries have been reported. In particular, accurate excitation energies have been obtained by the pivotal requirement of using CIPSI expansions with similar second-order perturbation corrections for each state, that is, a similar estimated distance to the full configuration interaction limit. Here, we elaborate on the CIPSI selection criterion for excited states of the same symmetry as the ground state, generating expansions from a common orbital set. Using these expansions in QMC as determinantal components of Jastrow−Slater wave functions, we compute the lowest, bright excited state of thiophene, which is challenging due to its significant multireference character. The resulting vertical excitation energies are within 0.05 eV of the best theoretical estimates, already with expansions of only a few thousand determinants. Furthermore, we relax the ground-and excited-state structures following the corresponding root in variational Monte Carlo and obtain bond lengths that are accurate to better than 0.01 Å. Therefore, while the full treatment at the CIPSI level of this system is quite demanding, in QMC, we can compute high-quality excitation energies and excited-state structural parameters building on affordable CIPSI expansions with relatively few, well-chosen determinants.
Malaria is a vector-borne infectious disease, caused by five different species of the genus Plasmodium, and is endemic to many tropical and sub-tropical countries of the globe. At present, malaria diagnosis at the primary health care level in India is conducted by either microscopy or rapid diagnostic test (RDT). In recent years, molecular diagnosis (by PCR assay), has emerged as the most sensitive method for malaria diagnosis. India is highly endemic to malaria and shoulders the burden of two major malaria parasites, Plasmodium falciparum and P. vivax. Previous studies using PCR diagnostic assay had unraveled several interesting facts on distribution of malaria parasites in India. However, these studies had several limitations from small sample size to limited geographical areas of sampling. In order to mitigate these limitations, we have collected finger-prick blood samples from 2,333 malaria symptomatic individuals in nine states from 11 geographic locations, covering almost the entire malaria endemic regions of India and performed all the three diagnostic tests (microscopy, RDT and PCR assay) and also have conducted comparative assessment on the performance of the three diagnostic tests. Since PCR assay turned out to be highly sensitive (827 malaria positive cases) among the three types of tests, we have utilized data from PCR diagnostic assay for analyses and inferences. The results indicate varied distributional prevalence of P. vivax and P. falciparum according to locations in India, and also the mixed species infection due to these two species. The proportion of P. falciparum to P. vivax was found to be 49:51, and percentage of mixed species infections due to these two parasites was found to be 13% of total infections. Considering India is set for malaria elimination by 2030, the present malaria epidemiological information is of high importance.
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