The study examined helminth parasites of cultured Clarias gariepinus and Tilapia zillii in Uyo, Akwa Ibom State. A total of 60 fish samples (30 each of C.gariepinus and T. zillii) were subjected to parasitological examinations. Results revealed a total of 47(78.33%) fishes infected with various species of parasites: Nematodes (Camallanus polypteri, Paracamallanus cyathopharynx, and Procamallanus laevionchus), Cestodes (Polyonchobothrium torulosus and P. clariae) and Trematodes (Dactylogyrus extensus and Glossiduim pedatum) in decreasing order of abundance. Out of the 60 fish samples examined, 47 were infected with 219 parasites: 142(64.84%) nematodes, 40(18.26%) cestodes and 37(16.89%) trematodes. A total of 159(72.60%) parasites were recovered from C. gariepinus out of which 103(64.78%) were nematodes, 19(18.45%) were cestodes and 37(35.92%) were trematodes. While 60(27.40%) parasites were recovered from T. zilli, of which 39(65.00%) were nematodes and 21(35.00%) cestodes. No trematode was observed in the tilapia. The overall prevalence of parasitic infection was 78.33%. The results of chi square analysis showed that females of both species had significantly higher (P<0.05) prevalence of infection 27(84.4%) than males 20(71.4%). Also, C. gariepinus had higher infection rate of 25(83.33%) when compared to 22(73.33%) recorded in T. zillii. Key words: fish parasites, aquaculture, prevalence, C. gariepinus, T. zillii