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Nuclear actin and myosin 1 (NM1) are key regulators of gene transcription. Here, we show by biochemical fractionation of nuclear extracts, protein-protein interaction studies and chromatin immunoprecipitation assays that NM1 is part of a multiprotein complex that contains WICH, a chromatin remodelling complex containing WSTF (Williams syndrome transcription factor) and SNF2h. NM1, WSTF and SNF2h were found to be associated with RNA polymerase I (Pol I) and ribosomal RNA genes (rDNA). RNA interference-mediated knockdown of NM1 and WSTF reduced pre-rRNA synthesis in vivo, and antibodies to WSTF inhibited Pol I transcription on pre-assembled chromatin templates but not on naked DNA. The results indicate that NM1 cooperates with WICH to facilitate transcription on chromatin.

Actin and nuclear myosin 1c (NM1) cooperate in RNA polymerase I (pol I) transcription. NM1 is also part of a multiprotein assembly, B-WICH, which is involved in transcription. This assembly contains the chromatin remodeling complex WICH with its subunits WSTF and SNF2h. We report here that NM1 binds SNF2h with enhanced affinity upon impairment of the actin-binding function. ChIP analysis revealed that NM1, SNF2h, and actin gene occupancies are cell cycle-dependent and require intact motor function. At the onset of cell division, when transcription is temporarily blocked, B-WICH is disassembled due to WSTF phosphorylation, to be reassembled on the active gene at exit from mitosis. NM1 gene knockdown and motor function inhibition, or stable expression of NM1 mutants that do not interact with actin or chromatin, overall repressed rRNA synthesis by stalling pol I at the gene promoter, led to chromatin alterations by changing the state of H3K9 acetylation at gene promoter, and delayed cell cycle progression. These results suggest a unique structural role for NM1 in which the interaction with SNF2h stabilizes B-WICH at the gene promoter and facilitates recruitment of the HAT PCAF. This leads to a permissive chromatin structure required for transcription activation.

To determine the function of actin in the cell nucleus, we sought to identify nuclear actin-binding proteins in the dipteran Chironomus tentans using DNase I-affinity chromatography. We identified the RNA-binding protein hrp65 as an actin-binding protein and showed that the C-terminal sequence of the hrp65-2 isoform is able to interact directly with actin in vitro. In vivo crosslinking and coimmunoprecipitation experiments indicated that hrp65 and actin are also associated in the living cell. Moreover, in vivo administration of a competing peptide corresponding to the C-terminal sequence of hrp65-2 disrupted the actin-hrp65-2 interaction and caused a specific and drastic reduction of transcription as judged by puff regression and diminished bromo-UTP incorporation. Our results indicate that an actin-based mechanism is implicated in the transcription of most if not all RNA polymerase II genes and suggest that an actin-hrp65-2 interaction is required to maintain the normal transcriptional activity of the cell. Furthermore, immunoelectron microscopy experiments and nuclear run-on assays suggest that the actin-hrp65-2 complex plays a role in transcription elongation.A ctin and myosin I are present not only in the cytoplasm but also in the cell nucleus (1, 2), where they have been implicated in transcription of protein-coding genes (3-5) and nuclear export (6). Many other cytoskeletal components have also been found in the cell nucleus, and some of them have been tentatively implicated in gene expression (reviewed in ref. 1).Actin has been found associated with (pre)-messenger ribonucleoprotein (pre-mRNP) complexes in a variety of organisms, and we recently revealed that actin is a bona fide component of the Balbiani ring (BR) pre-mRNP particles in the salivary gland cells of the dipteran Chironomus tentans (7). The BR genes code for large secretory proteins that are expressed in the salivary gland cells of C. tentans (reviewed in ref. 8). The BR pre-mRNAs are assembled into large RNP particles, the BR pre-mRNPs, that can be visualized directly by transmission electron microscopy (reviewed in ref. 9). Actin is incorporated cotranscriptionally into the newly synthesized BR pre-mRNPs by binding to a subset of heterogeneous nuclear RNP (hnRNP) proteins such as the hnRNP A1-like protein hrp36 (7). Remarkably, the presence of actin in RNP complexes is not restricted to the BR particles of C. tentans, because actin has also been found associated with certain hnRNP proteins of the A͞B group in mammalian pre-mRNPs (10).The presence of actin in the cell nucleus is well documented, but the precise role of nuclear actin is still not understood. To obtain further insight into the function(s) of nuclear actin, we sought to identify additional proteins of C. tentans that bind to actin in the cell nucleus. Materials and MethodsDetailed descriptions of the materials and methods can be found in Supporting Materials and Methods, which is published as supporting information on the PNAS web site, www.pnas.org.DNase I-Sepharose Pull-Down...

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