The planktonic synthesis of reduced organophosphorus molecules, such as alkylphosphonates and aminophosphonates, represents one half of a vast global oceanic phosphorus redox cycle. Whilst alkylphosphonates tend to accumulate in recalcitrant dissolved organic matter, aminophosphonates do not. Here, we identify three bacterial 2-aminoethylphosphonate (2AEP) transporters, named AepXVW, AepP and AepSTU, whose synthesis is independent of phosphate concentrations (phosphate-insensitive). AepXVW is found in diverse marine heterotrophs and is ubiquitously distributed in mesopelagic and epipelagic waters. Unlike the archetypal phosphonate binding protein, PhnD, AepX has high affinity and high specificity for 2AEP (Stappia stellulata AepX Kd 23 ± 4 nM; methylphosphonate Kd 3.4 ± 0.3 mM). In the global ocean, aepX is heavily transcribed (~100-fold>phnD) independently of phosphate and nitrogen concentrations. Collectively, our data identifies a mechanism responsible for a major oxidation process in the marine phosphorus redox cycle and suggests 2AEP may be an important source of regenerated phosphate and ammonium, which are required for oceanic primary production.
Inorganic phosphate is the major bioavailable form of the essential nutrient phosphorus. However, the concentration of phosphate in most natural habitats is low enough to limit microbial growth. Under phosphate-depleted conditions some bacteria utilise phosphite and hypophosphite as alternative sources of phosphorus, but the molecular basis of reduced phosphorus acquisition from the environment is not fully understood. Here, we present crystal structures and ligand binding affinities of periplasmic binding proteins from bacterial phosphite and hypophosphite ATP-binding cassette transporters. We reveal that phosphite and hypophosphite specificity results from a combination of steric selection and the presence of a P-H…π interaction between the ligand and a conserved aromatic residue in the ligand-binding pocket. The characterisation of high affinity and specific transporters has implications for the marine phosphorus redox cycle, and might aid the use of phosphite as an alternative phosphorus source in biotechnological, industrial and agricultural applications.
Background: Magnesium chelatase catalyzes the first essential step in chlorophyll biosynthesis.Results: Mutations in the AAA+ domain of the magnesium chelatase ChlD subunit reduce but do not abolish catalytic activity.Conclusion: ChlD is an allosteric regulator of magnesium chelatase.Significance: These observations reveal an essential role for the ChlD protein in the first committed stage in chlorophyll biosynthesis.
In chlorophyll biosynthesis,
the magnesium chelatase enzyme complex
catalyzes the insertion of a Mg2+ ion into protoporphyrin
IX. Prior to this event, two of the three subunits, the AAA+ proteins ChlI and ChlD, form a ChlID–MgATP complex. We used
microscale thermophoresis to directly determine dissociation constants
for the I-D subunits from Synechocystis, and to show that the formation of a ChlID–MgADP complex,
mediated by the arginine finger and the sensor II domain on ChlD,
is necessary for the assembly of the catalytically active ChlHID–MgATP
complex. The N-terminal AAA+ domain of ChlD is essential
for complex formation, but some stability is preserved in the absence
of the C-terminal integrin domain of ChlD, particularly if the intervening
polyproline linker region is retained. Single molecule force spectroscopy
(SMFS) was used to determine the factors that stabilize formation
of the ChlID–MgADP complex at the single molecule level; ChlD
was attached to an atomic force microscope (AFM) probe in two different
orientations, and the ChlI subunits were tethered to a silica surface;
the probability of subunits interacting more than doubled in the presence
of MgADP, and we show that the N-terminal AAA+ domain of
ChlD mediates this process, in agreement with the microscale thermophoresis
data. Analysis of the unbinding data revealed a most probable interaction
force of around 109 pN for formation of single ChlID–MgADP
complexes. These experiments provide a quantitative basis for understanding
the assembly and function of the Mg chelatase complex.
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