We revise the frogs of the genus Phrynoglossus from Indochina based on data of external morphology, bioacoustics and molecular genetics. The results of this integrative study provide evidence for the recognition of three distinct species, one of which we describe as new. Phrynoglossus martensii has a vast geographic distribution from central and southern Thailand across southern China to Vietnam, Laos, and Cambodia. Phrynoglossus myanhesseisp. nov. is distributed in central Myanmar whereas Phrynoglossus magnapustulosus is restricted to the Khorat Plateau, Thailand. These three species occur in allopatry and differ in their mating calls, external morphology, and in genetic distances of the 16S gene of 3.8–5.9%. Finally, we discuss and provide evolutionary evidence for the recognition of Phrynoglossus as a genus distinct from Occidozyga. Members of both genera form reciprocal monophyletic groups in our analyses of mtDNA data (16S) and are well differentiated from each other in morphology and ecology. Furthermore, they differ in the amplexus mode with Phrynoglossus having an inguinal amplexus whereas it is axillary in Occidozyga. We further provide a de novo draft genome of the holotype based on short-read sequencing technology to a coverage of 25-fold. This resource will permanently link the genetic characterization of the species to the name-bearing type specimen.

We revise the frogs of the genus Phrynoglossus from Indochina based on data of external morphology, bioacoustics and molecular genetics. The results of this integrative study provide evidence for the recognition of three distinct species, one of which we describe as new. Phrynoglossus martensii has a vast geographic distribution from central and southern Thailand across southern China to Vietnam, Laos, and Cambodia. Phrynoglossus myanhesseisp. nov. is distributed in central Myanmar whereas Phrynoglossus magnapustulosus is restricted to the Khorat Plateau, Thailand. These three species occur in allopatry and differ in their mating calls, external morphology, and in genetic distances of the 16S gene of 3.8–5.9%. Finally, we discuss and provide evolutionary evidence for the recognition of Phrynoglossus as a genus distinct from Occidozyga. Members of both genera form reciprocal monophyletic groups in our analyses of mtDNA data (16S) and are well differentiated from each other in morphology and ecology. Furthermore, they differ in the amplexus mode with Phrynoglossus having an inguinal amplexus whereas it is axillary in Occidozyga. We further provide a de novo draft genome of the holotype based on short-read sequencing technology to a coverage of 25-fold. This resource will permanently link the genetic characterization of the species to the name-bearing type specimen.

Based on two male and two female individuals, we describe a new genus and species of mud snake, Myanophis thanlyinensis gen. nov., sp. nov., from the vicinity of the campus of East Yangon University, Yangon, Thanlyin, Myanmar. This species differs from every other homalopsid species by the following combination of characters: (1) dorsal scales smooth, row formula 21–21–19 or 21–21–17; (2) tail short, ratio tail length/SVL 0.185–0.204 in males, 0.160–0.167 in females; (3) nasal scales separated; (4) 125–126 ventral scales in males, 120–122 in females; (5) 38–39 subcaudal scales in males, 32–34 in females; and (6) hemipenis bilobed. Its matrilineal genealogy (based on analyses of 16S and cytochrome b sequences), associates Myanophis thanlyinensis gen. nov., sp. nov. most closely with species of the genera Myrrophis and Gyiophis. The new taxon differs from the species of Myrrophis and Gyiophis by having a bilobed hemipenis (vs. unilobed). Myanophis thanlyinensis gen. nov., sp. nov. differs further from the species of Myrrophis by having 125–126 ventral scales in males and 120–122 in females (vs. 137–162 and 137–164, respectively), and 38–39 subcaudal scales in males and 32–34 in females (vs. 39–55 and 37–52, respectively). Myanophis thanlyinensis gen. nov., sp. nov. differs further from the species of Gyiophis by lacking dark blotches along flank (vs. present), and by having 21 dorsal scales rows at midbody (vs. 25). We provide an identification key to the homalopsid species known to occur in Myanmar. As a novelty to the classic holotype description and characterization, the individual has been genome sequenced by Illumina short-read technology and its genome has been assembled into a draft nuclear genome and a complete, annotated mitochondrial genome. This innovative approach comprehensively and permanently characterizes the genomic variation of the holotype.

Striking geographic variation in male advertisement calls was observed in frogs formerly referred to as Limnonectes doriae and L. limborgi, respectively. Subsequent analyses of mtDNA and external morphological data brought supporting evidence for the recognition of these populations as distinct species. We describe two new frog species of the genus Limnonectes (i.e., L. bagoensis sp. nov. and L. bagoyoma sp. nov.) from Myanmar. Limnonectes bagoensis sp. nov. is closely related to L. doriae whereas L. bagoyoma sp. nov. is closely related to L. limborgi. Results of this integrative study provide evidence for the presence of additional undescribed species in these species complexes but due to the lack of bioacoustical data, we consider these additional diverging populations as candidate species that need further study to resolve their respective taxonomic status. Both new species are distributed in Lower Myanmar. Limnonectes doriae is restricted to southern Myanmar along the Malayan Peninsula whereas L. limborgi is known to occur in eastern Myanmar and northwestern Thailand. The remaining populations formerly referred to as either L. doriae or L. limborgi are considered representatives of various candidate species that await further study. We further provide a de novo draft genome of the respective holotypes of L. bagoensis sp. nov. and L. bagoyoma sp. nov. based on short-read sequencing technology to 25-fold coverage.

The analyses of molecular genetic data (mtDNA markers 16S, ND4, CYTB, and the nuclear marker c-mos) provided evidence that the Asian cat snake taxa Boiga multomaculata and B. ochracea actually represent a single species. They form mixed clades of low intraclade genetic differentiation. This evidence for conspecificy is supported by the lack of differentiation in all examined pholidotic and morphometric characters. Therefore, we formally place Dipsas ochracea Theobald, 1868 in the synonymy of Dipsas multomaculata Boie, 1827. We provide a summary of the tangled taxonomic history of the taxa involved in this study. Also, we resurrect Dipsadomorphus stoliczkae Wall, 1909 from synonymy of B. ochracea, for specimens exhibiting 21 midbody dorsal scale rows. Boiga stoliczkae is found in the Himalayas north and west of the Brahmaputra valley. Finally, based on the detection of historical genetic lineages within the newly defined species Boiga multomaculata we recognize three subspecies: Boiga multomaculata multomaculata (Boie, 1827), Boiga multomaculata ochracea (Theobald, 1868), and Boiga multomaculata septentrionalis n. ssp. which is distributed in northern Myanmar and Assam and Nagaland, India. We designate BMNH 1946.1.2.60 (1) as neotype of Dipsas ochracea Theobald, (2) as lectotype of D. ochraceus Günther, and (3) as lectotype of Boiga ochracea walli Smith, thereby making these names objective synonyms. Finally, we designate BMNH 94.12.31.55 as lectotype of Dipsadomorphus stoliczkae Wall.