Filamentous microorganisms populations present in bio®lms from three wastewater treatment plants with a rotating biological contactor system have been studied. Results showed that ®laments are an integral component of the bio®lms, and that they were made up by: Beggiatoa ssp., Haliscomenobacter hydrossis, Sphaerotilus natans, Thiothrix ssp., and the 021N, 0803, 0914, 0961, 1701, 1851, and 1863 Eikelboom's types. Beggiatoa ssp. was the most frequent microorganism followed by S. natans and type 021N. Microthrix parvicella, Gordona amarae (=Nocardia amarae), Nostocoida limicola (I, II, III), and 0041, 0092, 0211, 0411, 0581, 0675, 1702, and 1852 Eikelboom's types appear infrequently.