Ecomorphological theory indicates that different ecological requirements lead to different organismal designs. Given that species with equal requirements could not coexist, traits leading to more efficient use of resources may be selected to avoid competition among closely related syntopic species, generating specialized ecomorphs. We compared habitat use, diet, thermal biology and morphology among the syntopic Tropidurus semitaeniatus, T. helenae and T. hispidus in the Caatinga of Northeastern Brazil. Tropidurus semitaeniatus and T. helenae are flattened lizards specialized to rocks and rock crevices, whereas T. hispidus has a robust body and generalist habits. We aimed to test the hypothesis that morphological modifications observed in the flattened ecomorphs are related to modifications in diet and habitat use. Also, we hypothesized that specialization to habitat induces morphological modifications, which in turn may constrain lizard performance. Flattened species differed in habitat use, morphology and prey size when compared with the generalist ecomorph. Morphological modifications were related to specializations to rocky habitats and constrained the variety of prey items consumed. This phenotype also reduced their reproductive output when compared with a robust, generalist ecomorph.