We present a theoretical analysis of a simple model of the depinning of an anchored semiflexible polymer from a fixed planar substrate in 1+1 dimensions. We consider a polymer with a discrete sequence of pinning sites along its contour. Using the scaling properties of the conformational distribution function in the stiff limit and applying the necklace model of phase transitions in quasi-one-dimensional systems, we obtain a melting criterion in terms of the persistence length, the spacing between pinning sites, a microscopic effective length that characterizes a bond, and the bond energy. The limitations of this and other similar approaches are discussed. We also consider the general problem of thermal depinning in 1+d dimensions. In the case of force-induced unbinding, it is shown that the bending rigidity favors the unbinding through a "lever-arm effect."

We explore the effect of an attractive interaction between parallel-aligned polymers which are perpendicularly grafted on a substrate. Such an attractive interaction could be due to, e.g., reversible cross-links. The competition between permanent grafting favoring a homogeneous state of the polymer brush and the attraction, which tends to induce in-plane collapse of the aligned polymers, gives rise to an instability of the homogeneous phase to a bundled state. In this latter state the in-plane translational symmetry is spontaneously broken and the density is modulated with a finite wavelength, which is set by the length scale of transverse fluctuations of the grafted polymers. We analyze the instability for two models of aligned polymers: directed polymers with line tension ε and weakly bending chains with bending stiffness κ.

In this paper we use non-Gaussian hydrodynamics to study the magnetic response of a flux-line liquid in the mixed state of a type-II superconductor. Both the derivation of our model, which goes beyond conventional Gaussian flux liquid hydrodynamics, and its relationship to other approaches used in the literature are discussed. We focus on the response to a transverse tilting field which is controlled by the tilt modulus, c44, of the flux array. We show that interaction effects can enhance c44 even in infinitely thick clean materials. This enhancement can be interpreted as the appearance of a disentangled flux-liquid fraction. In contrast to earlier work, our theory incorporates the nonlocality of the intervortex interaction in the field direction. This nonlocality is crucial for obtaining a nonvanishing renormalization of the tilt modulus in the thermodynamic limit of thick samples.

Some important biomolecules (for instance, bacterial FtsZ and eukaryotic DNA) are known to posses spontaneous (intrinsic) curvature. Using a simple extension of the wormlike chain model, we study the response of a weakly bending filament in two dimensions to a pulling force applied at its ends (a configuration common in classical in-vitro experiments and relevant to several in-vivo cell cases). The spontaneous curvature of such a chain or filament can in general be arc-length dependent and we study a case of sinusoidal variation, from which an arbitrary case can be reconstructed via Fourier transformation. We obtain analytic results for the force-extension relationship and the width of transverse fluctuations. We show that spontaneous-curvature undulations can affect the force-extension behavior even in relatively flexible filaments with a persistence length smaller than the contour length.

We explore the effect of random permanent cross-links on a system of directed polymers confined between two planes with their end points free to slide on them. We treat the cross-links as quenched disorder and we use a semimicroscopic replica field theory to study the structure and elasticity of this system. Upon increasing the cross-link density, we get a continuous gelation transition signaled by the emergence of a finite in-plane localization length. The distribution of localization length turns out to depend on the height along the preferred direction of the directed polymers. The gelation transition also gives rise to a finite in-plane shear modulus which we calculate and turns out to be universal, i.e., independent of the energy and length scales of the polymers and the cross-links. Using a symmetry argument, we show that cross-links of negligible extent along the preferred axis of the directed polymers do not cause any renormalization to the tilt modulus of the uncross-linked system.