Unmanned aerial vehicles (UAVs) are increasingly used in marine wildlife research. As technological developments rapidly advance the versatility and functionality of affordable UAVs, their potential as a marine aerial survey tool is quickly gaining attention. Currently, there is significant interest in whether cost-effective UAVs can outperform manned aircraft in aerial surveys of marine fauna at sea, although few empirical studies have compared relative sampling efficiency, accuracy and precision. Civil aviation restrictions, and subsequent available civilian technologies, make it unlikely that UAVs will currently be more effective than manned aircraft for large area marine surveys. UAVs do, however, have the capacity to fill a niche for intensive smaller spatial scale sampling and for undertaking aerial surveys in isolated locations. Improvements in UAV sensor resolutions and alternative sensor types, such as multispectral cameras, may increase area coverage, reduce perception error, and increase water penetration for sightability. Additionally, the further development of auto-detection software will rapidly improve image processing and further reduce human observer error inherent in manned aerial surveys. As UAV technologies and associated methodology is further developed and becomes more affordable, these aircraft will be increasingly adopted as a marine aerial survey tool in place of traditional methods using manned aircraft.

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The use of drones to study marine animals shows promise for the examination of numerous aspects of their ecology, behaviour, health and movement patterns. However, the responses of some marine phyla to the presence of drones varies broadly, as do the general operational protocols used to study them. Inconsistent methodological approaches could lead to difficulties comparing studies and can call into question the repeatability of research. This review draws on current literature and researchers with a wealth of practical experience to outline the idiosyncrasies of studying various marine taxa with drones. We also outline current best practice for drone operation in marine environments based on the literature and our practical experience in the field. The protocols outlined herein will be of use to researchers interested in incorporating drones as a tool into their research on marine animals and will help form consistent approaches for drone-based studies in the future.