Understanding the diversity of cell types in the brain has been an enduring challenge and requires detailed characterization of individual neurons in multiple dimensions. To profile morpho-electric properties of mammalian neurons systematically, we established a single cell characterization pipeline using standardized patch clamp recordings in brain slices and biocytin-based neuronal reconstructions. We built a publicly-accessible online database, the Allen Cell Types Database, to display these data sets. Intrinsic physiological and morphological properties were measured from over 1,800 neurons from the adult laboratory mouse visual cortex. Quantitative features were used to classify neurons into distinct types using unsupervised methods. We establish a taxonomy of morphologically-and electrophysiologically-defined cell types for this region of cortex with 17 e-types and 35 m-types, as well as an initial correspondence with previously-defined transcriptomic cell types using the same transgenic mouse lines. INTRODUCTION Neurons of the mammalian neocortex exhibit diverse physiological and morphological characteristics. Classifying these neurons into cell types, following Plato's dictum to "carve
Summary Gene expression studies suggest that differential ion channel expression contributes to differences in rodent versus human neuronal physiology. We tested whether h-channels more prominently contribute to the physiological properties of human compared to mouse supragranular pyramidal neurons. Single cell/nucleus RNA sequencing revealed ubiquitous HCN1-subunit expression in excitatory neurons in human, but not mouse supragranular layers. Using patch-clamp recordings, we found stronger h-channel-related membrane properties in supragranular pyramidal neurons in human temporal cortex, compared to mouse supragranular pyramidal neurons in temporal association area. The magnitude of these differences depended upon cortical depth and was largest in pyramidal neurons in deep L3. Additionally, pharmacologically blocking h-channels produced a larger change in membrane properties in human compared to mouse neurons. Finally, using biophysical modeling, we provided evidence that h-channels promote the transfer of theta frequencies from dendriteto-soma in human L3 pyramidal neurons. Thus, h-channels contribute to between-species differences in a fundamental neuronal property.
Device-to-device (D2D) communication enables direct communication between proximate devices thereby improving the overall spectrum utilization and offloading traffic from cellular networks. This paper develops a new spatial model for D2D networks in which the device locations are modeled as a Poisson cluster process. Using this model, we study the performance of a typical D2D receiver in terms of coverage probability under two realistic content availability setups: (i) content of interest for a typical device is available at a device chosen uniformly at random from the same cluster, which we term uniform content availability, and (ii) content of interest is available at the k th closest device from the typical device inside the same cluster, which we term k-closest content availability. Using these coverage probability results, we also characterize the area spectral efficiency (ASE) of the whole network for the two setups. A key intermediate step in this analysis is the derivation of the distributions of distances from a typical device to both the intra-and inter-cluster devices. Our analysis reveals that an optimum number of D2D transmitters must be simultaneously activated per cluster in order to maximize ASE.This can be interpreted as the classical tradeoff between more aggressive frequency reuse and higher interference power. The optimum number of simultaneously transmitting devices and the resulting ASE increase as the content is made available closer to the receivers. Our analysis also quantifies the best and worst case performance of clustered D2D networks both in terms of coverage and ASE. Index TermsDevice-to-device (D2D) communication, clustered D2D network, Poisson cluster process, Thomas cluster process, stochastic geometry.M. Afshang is with Wireless@VT,
The neocortex is disproportionately expanded in human compared with mouse1,2, both in its total volume relative to subcortical structures and in the proportion occupied by supragranular layers composed of neurons that selectively make connections within the neocortex and with other telencephalic structures. Single-cell transcriptomic analyses of human and mouse neocortex show an increased diversity of glutamatergic neuron types in supragranular layers in human neocortex and pronounced gradients as a function of cortical depth3. Here, to probe the functional and anatomical correlates of this transcriptomic diversity, we developed a robust platform combining patch clamp recording, biocytin staining and single-cell RNA-sequencing (Patch-seq) to examine neurosurgically resected human tissues. We demonstrate a strong correspondence between morphological, physiological and transcriptomic phenotypes of five human glutamatergic supragranular neuron types. These were enriched in but not restricted to layers, with one type varying continuously in all phenotypes across layers 2 and 3. The deep portion of layer 3 contained highly distinctive cell types, two of which express a neurofilament protein that labels long-range projection neurons in primates that are selectively depleted in Alzheimer’s disease4,5. Together, these results demonstrate the explanatory power of transcriptomic cell-type classification, provide a structural underpinning for increased complexity of cortical function in humans, and implicate discrete transcriptomic neuron types as selectively vulnerable in disease.
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