The mutations in the quinolone resistance-determining region of the gyrA and gyrB genes from 27 clinical isolates of Escherichia coli with a range of MICs of ciprofloxacin from 0.007 to 128 ,ug/ml and of nalidixic acid from 2 to >2,000 ,ug/ml were determined by DNA sequencing. All 15 isolates with ciprofloxacin MICs of .1 ,ug/ml showed a change in Ser-83 to Leu of GyrA protein, whereas in clinical isolates with a MIC of .8 ,ug/ml (11 strains), a double change in Ser-83 and Asp-87 was found. All isolates with a MIC of nalidixic acid of .128 ,ug/ml showed a mutation at amino acid codon Ser-83. Only 1 of the 27 clinical isolates of E. coli analyzed showed a change in Lys-447 of the B subunit of DNA gyrase. A change in Ser-83 is sufficient to generate a high level of resistance to nalidixic acid, whereas a second mutation at Asp-87 in the A subunit of DNA gyrase may play a complementary role in developing the strain's high levels of ciprofloxacin resistance.New fluoroquinolones are broad-spectrum antibacterial agents which inhibit DNA gyrase activity (26). DNA gyrase contains two subunits of GyrA and two subunits of GyrB (13,19). Gyrase A mediates DNA strand breakage and reunion with the Tyr residue at position 122 forming a transient phosphotyrosine linkage with a broken DNA strand. The mechanisms of quinolone resistance essentially fall into two classes: (i) mutations in gyrA (1,2,5,6,8,17,28,30) or gyrB genes (27, 29) or (ii) reduced levels of quinolone accumulation in the cells (3, 4, 9-12). The mutations in the gyrA gene involved in the resistance are clustered in a region between nucleotides 199 (Ala-67) and 318 (Gln-106), which contains nucleotide 247 (Ser-83), the most frequently changed in spontaneus gyrA mutations. In the gyrB gene, two quinolone resistance-determining sites (amino acids 426 and 447) have been found (27,29). The mutation at amino acid codon Asp-426 confers resistance to nalidixic acid and the new fluoroquinolones, whereas the change of Lys-447 results in resistance to nalidixic acid and increased susceptibility to the fluoroquinolones (29). Recently, Heisig et al. (8) identified mutations in the gyrA gene of Escherichia coli 205096, a highly fluoroquinolone-resistant strain (MIC of ciprofloxacin, 128 ,ug/ml). From 1989 to 1993, the level of resistance to ciprofloxacin in our hospital increased from 0 to 16% in E. coli isolated from urine samples. To further assess the importance of these gyrA and gyrB mutations in the acquisition of high-level quinolone resistance, we examined by DNA sequencing 27 clinical isolates of E. coli with a range of MICs of ciprofloxacin from 0.007 to 128 ,ug/ml and of nalidixic acid from 2 to >2,000 ,ug/ml.The clinical isolates of E. coli were obtained from urine samples from outpatients, who had not previously received quinolones,