BackgroundOocyte maturation and preimplantation embryo development are controlled by array of genes that are post-transcriptionally regulated by microRNAs. With respect to this, previously, we identified altered expression of microRNA-130b (miR-130b) during oocyte maturation. Here, we aimed to investigate the role of miR-130b in bovine granulosa and cumulus cell function, oocyte maturation and preimplantation embryo development using gain- and loss-of- function approach.MethodsFor this study, the granulosa cells, cumulus cells and the oocytes were collected from ovaries obtained from slaughterhouse. The genes targeted by miR-130b were identified using dual-luciferase reporter assay. The role of miR-130b in granulosa and cumulus cell function was investigated by increasing and inhibiting its expression in in vitro cultured cells using miR-130b precursor and inhibitor, respectively while the role of miR-130b on oocyte development, immature oocytes were microinjected with miR-130b precursor and inhibitor and the polar body extrusion, the proportion of oocytes reaching to metaphase II stage and the mitochondrial were determined in each oocyte group 22 h after microinjection. Moreover, to investigate the role of miR-130b during preimplantation embryo development, zygote stage embryos were microinjected with miR-130b precursor or inhibitor and the cleavage rate, morula and blastocyst formation was analyzed in embryos derived from each zygote group after in vitro culture.ResultsThe luciferase assay showed that SMAD5 and MSK1 genes were identified as the direct targets of miR-130b. Overexpression of miR-130b increased the granulosa and cumulus cell proliferation, while inhibition showed the opposite phenotype. Apart from these, modulation of miR-130b altered the lactate production and cholesterol biosynthesis in cumulus cells. Furthermore, inhibition of miR-130b expression during oocyte in vitro maturation reduced the first polar body extrusion, the proportion of oocytes reaching to metaphase II stage and the mitochondrial activity, while inhibition of miR-130b during preimplantation embryo development significantly reduced morula and blastocyst formation.ConclusionThis study demonstrated that in vitro functional modulation of miR-130b affected granulosa and cumulus cell proliferation and survival, oocyte maturation, morula and blastocyst formation suggesting that miR-130b is involved in bovine oocyte maturation and preimplantation embryo development.Electronic supplementary materialThe online version of this article (doi:10.1186/s13048-017-0336-1) contains supplementary material, which is available to authorized users.

The article identifies the core literature available on flood ontologies and presents a review on these ontologies from various perspectives like its purpose, type, design methodologies, ontologies (re)used, and also their focus on specific flood disaster phases. The study was conducted in two stages: i) literature identification, where the systematic literature review methodology was employed; and, ii) ontological review, where the parametric approach was applied. The study resulted in a set of fourteen papers discussing the flood ontology (FO). The ontological review revealed that most of the flood ontologies were task ontologies, formal, modular, and used web ontology language (OWL) for their representation. The most (re)used ontologies were SWEET, SSN, Time, and Space. METHONTOLOGY was the preferred design methodology, and for evaluation, application-based or data-based approaches were preferred. The majority of the ontologies were built around the response phase of the disaster. The unavailability of the full ontologies somewhat restricted the current study as the structural ontology metrics are missing. But the scientific community, the developers, of flood disaster management systems can refer to this work for their research to see what is available in the literature on flood ontology and the other major domains essential in building the FO.

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