A human brainstem cDNA library in bacteriophage Agtll was screened under conditions of reduced hybridization stringency with a leukocyte common antigen (LCA) probe that spanned both conserved cytoplasmic domains. cDNA encoding a receptor-linked protein-tyrosinephosphatase (protein-tyrosine-phosphate phosphohydrolase, EC 3.1.3.48), RPTPase a, has been cloned and sequenced. Human RPTPase a consists of 802 amino acids. The extracellular domain of 150 residues includes a hydrophobic signal peptide and eight potential N-glycosylation sites. This is followed by a transmembrane region and two tandemly repeated conserved domains characteristic of all RPTPases identified thus far. The gene for RPTPase a has been localized to human chromosome region 20pter-20q12 by analysis of its segregation pattern in rodent-human somatic cell hybrids. Northern blot analysis revealed the presence of two major transcripts of 4.3 and 6.3 kilobases. In addition to RPTPase a, two other RPTPases (, and y), identified in the same screen, have been partially cloned and sequenced. Analysis of sequence comparisons among LCA, the LCA-related protein LAR, and RPTPases a, A, and y reveal4 the existence of a multigene family encoding different RPTPases, each containing a distinct extracellular domain, a single hydrophobic transmembrane region, and two tandemly repeated conserved cytoplasmic domains.The degree and pattern of phosphorylation of tyrosine residues on cellular proteins are regulated by the opposing activities of protein-tyrosine kinases (PTKases; ATP:protein-tyrosine O-phosphotransferase, EC 2.7.1.112) and protein-tyrosine-phosphatases (PTPases; protein-tyrosine-phosphate phosphohydrolase, EC 3.1.3.48). The structural characteristics and evolution of PTKases as well as their role in the regulation of cell growth have been considered elsewhere (1, 2). More recently, attention has also been focused on the growing family of PTPases. This family includes two types of molecules: (i) low molecular weight proteins such as PTPase 1B (3, 4), T-cell PTPase (5), and rat brain PTPase (6), which contain a single conserved phosphatase domain, and (ii) high molecular weight, receptor-linked PTPases (RPTPases) containing two tandemly repeated conserved domains separated by 56-57 amino acids. Examples of these include the leukocyte common antigen (LCA), also known as CD45 (7,8)