Background: Since its sudden appearance and link to microcephaly in 2015, the number of PubMed references for Zika virus (ZIKV) has risen from 181 to 5163, at time of writing, with a vast proportion focused on the consequences of ZIKV infection during pregnancy. This level of attention underlies increased demand for sensitive and specific diagnostic tools able to assess risk to an unborn child, as well as to understand the dynamics and consequences of viral persistence. Aim: Review the expanding knowledge on ZIKV persistence and diagnostic challenges and summarize current advancements in detection. Sources: Peer-reviewed articles based on the search terms 'Zika' and 'ZIKV' combined with the terms 'diagnostics' 'point-of-care diagnostics' 'viral load' 'persistence' 'detection' 'treatment' 'nucleic acid amplification testing' 'microsphere' 'PVRT' 'RVNT' 'RT-LAMP' 'NASBA' SIBA' 'RPA' 'SHERLOCK' 'ELISA', and 'TMA' as well as laboratory experience of the authors. Content: Topics covered include the emergence of the ZIKV epidemic, pathogenesis of ZIKV infection, the nature of ZIKV persistence, complications in serological diagnosis, tried and novel diagnostic laboratory techniques, and a recent accounting of point-of-care testing (POCT) methods. Implications: Surveillance and research in the case of ZIKV has shifted into a more rapid and coordinated worldwide directive than has occurred with most viral epidemics to date. The particular concentration of outbreaks in resource-limited settings increases the need for simple assays capable of reliable, inexpensive, high-throughput ZIKV diagnosis. This review serves to both catalogue current diagnostic options and consider their suitability at point-of-care. R.
Alere i RSV is a novel rapid test which applies a nicking enzyme amplification reaction to detect respiratory syncytial virus in point-of-care settings. In this study, we evaluated the Alere i RSV assay by using frozen nasopharyngeal swab samples that were collected in viral transport medium from children hospitalized with acute respiratory tract infection during the 2015-2016 winter season. Alere i RSV assay results were compared to those for Altona RealStar RSV real-time reverse transcription-PCR (RT-PCR). We found that the overall sensitivity and specificity of the Alere i RSV test was 100% (95% confidence intervals [CI], 93% to 100%) and 97% (95% CI, 89% to 100%), respectively. Positive samples were identified within 5 to 7 min from sample collection. Overall, the Alere i RSV test performed well compared to the RT-PCR assay and has the potential to facilitate the detection of RSV in point-of-care settings.
Changing predator communities have been implicated in reduced survival of white-tailed deer (Odocoileus virginianus) fawns. Few studies, however, have used field-based age-specific estimates for survival and fecundity to assess the relative importance of low fawn survival on population growth and harvest potential. We studied white-tailed deer population dynamics on Tensas River National Wildlife Refuge (TRNWR) in Louisiana, USA, where the predator community included bobcats (Lynx rufus), coyotes (Canis latrans), and a restored population of Louisiana black bear (Ursus americanus luteolus). During 2013-2015, we radio-collared and monitored 70 adult (≥2.5 yrs) and 21 yearling (1.5-yr-old) female deer. Annual survival averaged 0.815 (95% CI = 0.734-0.904) for adults and 0.857 (95% CI = 0.720-1.00) for yearlings. We combined these estimates with concurrently collected fawn survival estimates (0.27; 95% CI = 0.185-0.398) to model population trajectories and elasticities. We used estimates of nonhunting survival (annual survival estimated excluding harvest mortality) to project population growth (λ) relative to 4 levels of harvest (0, 10%, 20%, 30%). Finally, we investigated effects of reduced fawn survival on population growth under current management and with elimination of female harvest. Despite substantial fawn predation, the deer population on TRNWR was increasing (λ = 1.06) and could sustain additional female harvest; however, the population was expected to decline at 20% (λ = 0.98) and 30% (λ = 0.94) female harvest. With no female harvest, the population was projected to increase with observed (λ = 1.15) and reduced fawn survival (λ = 1.02), but the population could not sustain current female harvest (10%) if fawn survival declined (λ = 0.90). For all scenarios, adult female survival was the most elastic parameter. Given the importance of adult female survival, the relative predictability in response of adult survival to harvest management, and the difficulty in altering fawn survival, reducing female harvest is likely the most efficient approach to compensate for low fawn survival. On highly productive sites such as ours, reduction, but not necessarily elimination, of harvest can mitigate effects of low fawn survival on population growth.
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