Heart rate data collected during nonlaboratory conditions present several data-modeling challenges. First, the noise in such data is often poorly described by a simple Gaussian; it has outliers and errors come in bursts. Second, in large-scale studies the ECG waveform is usually not recorded in full, so one has to deal with missing information. In this paper, we propose a robust postprocessing model for such applications. Our model to infer the latent heart rate time series consists of two main components: unsupervised clustering followed by Bayesian regression. The clustering component uses auxiliary data to learn the structure of outliers and noise bursts. The subsequent Gaussian process regression model uses the cluster assignments as prior information and incorporates expert knowledge about the physiology of the heart. We apply the method to a wide range of heart rate data and obtain convincing predictions along with uncertainty estimates. In a quantitative comparison with existing postprocessing methodology, our model achieves a significant increase in performance.
The critical behavior of the contact process (CP) in heterogeneous periodic and weakly-disordered environments is investigated using the supercritical series expansion and Monte Carlo (MC) simulations. Phase-separation lines and critical exponents β (from series expansion) and η (from MC simulations) are calculated. A general analytical expression for the locus of critical points is suggested for the weak-disorder limit and confirmed by the series expansion analysis and the MC simulations. Our results for the critical exponents show that the CP in heterogeneous environments remains in the directed percolation (DP) universality class, while for environments with quenched disorder, the data are compatible with the scenario of continuously changing critical exponents.
The one-dimensional contact process (CP) in a heterogeneous environment-a binary chain consisting of two types of site with different recovery rates-is investigated. It is argued that the commonly used random-sequential Monte Carlo simulation method which employs a discrete notion of time is not faithful to the rates of the contact process in a heterogeneous environment. Therefore, a modification of this algorithm along with two alternative continuous-time implementations are analyzed. The latter two are an adapted version of the n -fold way used in Ising model simulations and a method based on a modified priority queue. It is demonstrated that the commonly used (but incorrect as we believe) discrete-time method yields a different critical threshold from all other algorithms considered. Finite-size scaling of the lowest gap in the spectrum of the Liouville time-evolution operator for the CP gives an estimate of the critical rate which supports these findings. Further, a performance test indicates an advantage in using the continuous-time methods in systems with heterogeneous rates. This result promises to help in the analysis of the CP in disordered systems with heterogeneous rates in which simulation is a challenging task due to very long relaxation times.
The dynamic behaviour of stochastic spreading processes on a network model based on k-regular graphs is investigated. The contact process and the susceptible-infected-susceptible model for the spread of epidemics are considered as prototype stochastic spreading processes. We study these on a network consisting of a mixture of 2-and 3-fold coordinated randomly-connected nodes of concentration p and 1 − p, respectively, with p varying between 0 and 1. Varying the parameter p from p = 0 (3-regular graph of infinite dimension) to p = 1 (2-regular graph -1D chain) allows us to investigate their behaviour under such structural changes. Both processes are expected to exhibit mean-field features for p = 0 and features typical of the directed percolation universality class for p = 1 . The analysis is undertaken by means of Monte Carlo simulations and the application of mean-field theory. The quasi-stationary simulation method is used to obtain the phase diagram for the processes in this environment along with critical exponents. Predictions for critical exponents obtained from mean-field theory are found to agree with simulation results over a large range of values for p up to a value of p = 0.95, where the system is found to sharply cross over to the one-dimensional case. Estimates of critical thresholds given by mean-field theory are found to underestimate the corresponding critical rates obtained numerically for all values of p.
The critical behavior of the contact process (CP) in disordered and periodic binary two-dimensional (2D) lattices is investigated numerically by means of Monte Carlo simulations as well as via an analytical approximation and standard mean field theory. Phase-separation lines calculated numerically are found to agree well with analytical predictions around the homogeneous point. For the disordered case, values of static scaling exponents obtained via quasistationary simulations are found to change with disorder strength. In particular, the finite-size scaling exponent of the density of infected sites approaches a value consistent with the existence of an infinite-randomness fixed point as conjectured before for the 2D disordered CP. At the same time, both dynamical and static scaling exponents are found to coincide with the values established for the homogeneous case thus confirming that the contact process in a heterogeneous environment belongs to the directed percolation universality class.
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