This work is inspired by the sudden resurgence of the submersed aquatic vegetation (SAV) bed in the Chesapeake Bay (USA). Because the SAV bed occurs at the mouth of the Bay's main tributary (Susquehanna River), it plays a significant role in modulating sediment and nutrient inputs from the Susquehanna to the Bay. Previous model studies on the impact of submersed aquatic vegetation on the development of river mouth bars lacked a complete mechanistic understanding. This study takes advantage of new advances in 3D computational models that include explicit physical‐sedimentological feedbacks to obtain this understanding. Specifically, we used Delft3D, a state‐of‐the‐art hydrodynamic model that provides fine‐scale computations of three‐dimensional flow velocity and bed shear stress, which can be linked to sediment deposition and erosion. Vegetation is modeled using a parameterization of hydraulic roughness that depends on vegetation height, stem density, diameter, and drag coefficient. We evaluate the hydrodynamics, bed shear stresses, and sediment dynamics for different vegetation scenarios under conditions of low and high river discharge. Model runs vary the vegetation height, density, river discharge, and suspended‐sediment concentration. Numerical results from the idealized model show that dense SAV on river mouth bars substantially diverts river discharge into adjacent channels and promotes sediment deposition at ridge margins, as well as upstream bar migration. Increasing vegetation height and density forms sandier bars closer to the river mouth and alteration of the bar shape. Thus, this study highlights the important role of SAV in shaping estuarine geomorphology, which is especially relevant for coastal management. © 2019 John Wiley & Sons, Ltd.

Tidal marshes form at the confluence between estuarine and marine environments where tidal movement regulates their developmental processes. Here, we investigate how the interplay between tides, channel morphology, and vegetation affect sediment dynamics in a low energy tidal marsh at the Paul S. Sarbanes Ecosystem Restoration Project at Poplar Island. Poplar Island is an active restoration site where fine-grained material dredged from navigation channels in the upper Chesapeake Bay are being used to restore remote tidal marsh habitat toward the middle bay (Maryland, USA). Tidal currents were measured over multiple tidal cycles in the inlets and tidal creeks of one marsh at Poplar Island, Cell 1B, using Acoustic Doppler Current Profilers (ADCP) to estimate water fluxes throughout the marsh complex. Sediment fluxes were estimated using acoustic backscatter recorded by ADCPs and validated against total suspended solid measurements taken on site. A high-resolution geomorphic survey was conducted to capture channel cross sections and tidal marsh morphology. We integrated simple numerical models built in Delft3d with empirical observations to identify which eco-geomorphological factors influence sediment distribution in various channel configurations with differing vegetative characteristics. Channel morphology influences flood-ebb dominance in marshes, where deep, narrow channels promote high tidal velocities and incision, increasing sediment suspension and reducing resilience in marshes at Poplar Island. Our numerical models suggest that accurately modelling plant phenology is vital for estimating sediment accretion rates. In-situ observations indicate that Poplar Island marshes are experiencing erosion typical for many Chesapeake Bay islands. Peak periods of sediment suspension frequently coincide with the largest outflows of water during ebb tides resulting in large sediment deficits. Ebb dominance (net sediment export) in tidal marshes is likely amplified by sea-level rise and may lower marsh resilience. We couple field observations with numerical models to understand how tidal marsh morphodynamics contribute to marsh resilience.

The potential for rapid coastline modification in the face of sea‐level rise or other stressors is alarming, since coasts are often densely populated and support valuable infrastructure. In addition to coastal submergence, nutrient‐related water pollution is a growing concern for coastal wetlands. Previous studies found that the Suspended Sediment Concentration (SSC) of coastal wetlands acts as a first‐order control of their sustainability, but SSC dynamics are poorly understood. Our study focuses on the Virginia Coast Reserve (VCR) Long Term Ecological Research (LTER) site, a shallow multiple tidal inlet system in the USA. We apply numerical modelling (Delft3D‐SWAN) and subsequent analyses to determine SSC dynamics within the VCR. In particular, we consider two important controls on SSC in the system: vegetation (seagrass and salt marsh) and offshore waves. Our results show that vegetation colonies and increased wave energy lengthen water residence time. The reduction in the tidal prism decreases SSC export from the bay via tidal inlets, leading to increased sediment retention in the bay. We found that alongshore currents can enhance lagoon SSC by importing fine sediments from an adjacent inlet along the coastline. Our numerical experiments on vegetation seasonality can improve the understanding of wave climate impact on coastal bay sediment budget. Offshore waves increase sediment export from coastal bays, particularly during winter seasons with low vegetation density. Therefore, our study can help managers and stakeholders to understand how to implement restoration strategies for the VCR. © 2020 John Wiley & Sons, Ltd.