ABINIT is a package whose main program allows one to find the total energy, charge density, electronic structure and many other properties of systems made of electrons and nuclei, (molecules and periodic solids) within Density Functional Theory (DFT), Many-Body Perturbation Theory (GW approximation and Bethe-Salpeter equation) and Dynmical Mean Field Theory (DMFT). ABINIT also allows to optimize the geometry according to the DFT forces and stresses, to perform molecular dynamics simulations using these forces, and to generate dynamical matrices, Born effective charges and dielectric tensors. The present paper aims to describe the new capabilities of ABINIT that have been developed since 2009. It covers both physical and technical developments inside the ABINIT code, as well as developments provided within the ABINIT package. The developments are described with relevant references, input variables, tests and tutorials.
The structural, electronic, and vibrational properties of glassy Ge x Se 1−x are studied using density-functionalbased molecular dynamics. The focus is on four compositions (x = 10%,20%,25%,33%) spanning the rigidity transitions and representing typical compositions of flexible, intermediate, and stressed rigid systems. We investigate structural properties including structure factors, pair distribution functions, angular distributions, coordination numbers, and neighbor distributions and compare our results with experimental findings, when available. Most noticeable is the excellent agreement found in the reproduction of the structure in real and reciprocal space which allows tracking the effect of Ge composition on the structure. Ring statistics and ring correlations are examined and followed across the rigidity transition, and the details of typical small rings show a much more complex picture than established previously. A comparison is made with simple bond models and their validity is discussed. Topological constraint analysis is performed and shows that the onset of rigidity changes substantially the angular motion inside the Ge tetrahedra, which displays increased soft bending motions in the stressed rigid phase. We then investigate the vibrational properties via the vibrational density of states and the dielectric function (infrared absorption), and discuss them with respect to experimental findings. Finally, the electronic properties are computed and show an excellent agreement with respect to previous first-principles simulations and to experiments.
ISAACS (interactive structure analysis of amorphous and crystalline systems) is a cross‐platform program developed to analyze the structural characteristics of three‐dimensional structure models built by computer simulations. The models may have any degree of periodicity (i.e. crystallinity) and local symmetry. The following structural information is computed from the models: total and partial radial distribution functions and structure factors for X‐ray or neutron scattering, coordination numbers, bond‐angle and near atomic neighbor distributions, bond‐valence sums, ring statistics, and spherical harmonics invariants. The information may be visualized conveniently and stored for further use.
Surfactant distribution heterogeneities at a fluid/fluid interface trigger the Marangoni effect, i.e. a bulk flow due to a surface tension gradient. The influence of surfactant solubility in the bulk on these flows remains incompletely characterized. Here we study Marangoni flows sustained by injection of hydrosoluble surfactants at the air/water interface. We show that the flow extent increases with a decrease of the critical micelle concentration, i.e. the concentration at which these surfactants self-assemble in water. We document the universality of the surface velocity field and predict scaling laws based on hydrodynamics and surfactant physicochemistry that capture the flow features.
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