Peanut stunt virus (PSV) is a member of the genus Cucumovirus in the family Bromoviridae. Other members of the genus are its type member Cucumber mosaic virus (CMV) and Tomato aspermy virus (TAV). PSV like other cucumoviruses has a tripartite genome of positive strand RNAs, designated RNA1, RNA2 and RNA3, in other decreasing size. PSV is an economically important pathogen and occurs worldwide in legume plants. Since PSV was first described in the United States in 1966, many strains of PSV have been characterized. In Korea, there has been previous record on PSV infection of peanut, black locast, red goosefoot and white clover (The Korean Society of Plant Pathology, 2009). In Sangju County of South Korea in 2005, a PSV (PSV-K1) was first detected using RT-PCR from naturally infected soybean showing yellow mosaic on the leaves and virus particles were isolated from these infected leaves (Fig. 1A). Purified virus preparations were revealed the presence of small isometric virions of 28 nm in diameter (Fig. 1B).The nucleotide sequence of full-length RNA3 from PSV strain K1 was determined. PSV-K1 RNA3 is 2089 nucleotides (nt) organized into two putative ORFs and 5'-and 3'-untranslated regions (UTRs) of 52 and 229nt, respectively. Two large open reading frames (ORFs) encoded a putative movement protein (MP) (nt 53−925) and a coat protein (CP) (nt 1183−1860) predicted to be a 31-kDa protein (P31) and a 25-kDa protein (P25), respectively. ORF3a (MP) is separated from the next ORF3b (CP) by an IR noncoding region (internal region) 257nt in length (nt 926−1182).Multiple sequence alignments were generated using DNAMAN 7.0 (Lynnon Biosoft, Quebec, Canada) on the basis of complete nucleotide sequences of PSV RNA3, and a phylogenetic tree was constructed by the neighbor-joining algorithm (Fig. 2). Bootstrap analysis was performed with 1,000 replicates. The resulting tree of RNA3 revealed that PSV-K1 RNA3 is more closely related to that of PSV-ER (94.6%) than to those of other cucumoviruses. Percent nucleotide sequence identities of RNA3 from PSV-K1 ranged from 58.7 to 94.6% with RNA3 sequences of members of the genus Cucumovirus. PSV was first divided into two subgroups based on a wide range of comparative analyses, including serology, competition hybridization and sequence comparison (Hu et al., 1997).Recently, the complete nucleotide (nt) sequence of PSV-Mi and PSV-Rp strain was determined, and based on nt sequence diversity, the establishment of a subgroup and was proposed (Yan et al., 2005 andKiss et al., 2008).Phylogenetic analyses of PSV-K1 show clearly that this strain is related to representatives of subgroup containing PSV-ER. Based on these data, we conclude that PSV is closely related to PSV-ER strain from cowpea and it is the first report of PSV on soybean in Korea. References Hu, C. C., Aboul-Ata, A. E., Naidu, R. A. and Ghabrial, S. A. 1997. Evidence for the occurrence of two distinct subgroups of peanut stunt cucumovirus strains: molecular characterization of RNA3. J. Gen. Virol. 78:929−939. Kiss, L., Sebestyen, ...
scite is a Brooklyn-based organization that helps researchers better discover and understand research articles through Smart Citations–citations that display the context of the citation and describe whether the article provides supporting or contrasting evidence. scite is used by students and researchers from around the world and is funded in part by the National Science Foundation and the National Institute on Drug Abuse of the National Institutes of Health.
customersupport@researchsolutions.com
10624 S. Eastern Ave., Ste. A-614
Henderson, NV 89052, USA
This site is protected by reCAPTCHA and the Google Privacy Policy and Terms of Service apply.
Copyright © 2024 scite LLC. All rights reserved.
Made with 💙 for researchers
Part of the Research Solutions Family.