At one extreme of the proton-transfer spectrum in cocrystals, proton transfer is absent, whilst at the opposite extreme, in salts, the proton-transfer process is complete. However, for acid-base pairs with a small ÁpK a (pK a of base À pK a of acid), prediction of the extent of proton transfer is not possible as there is a continuum between the salt and cocrystal ends. In this context, we attempt to illustrate that in these systems, in addition to ÁpK a , the crystalline environment could change the extent of proton transfer. To this end, two compounds of salicylic acid (SaH) and adenine (Ad) have been prepared. Despite the same small ÁpK a value (%1.2), different ionization states are found. Both crystals, namely adeninium salicylate monohydrate, C 5 H 6 N 5 + ÁC 7 H 5 O 3 À ÁH 2 O, I, and adeninium salicylate-adenine-salicylic acid-water (1/2/1/2), C 5 H 6 N 5 + ÁC 7 H 5 O 3 À Á-2C 5 H 5 N 5 ÁC 7 H 6 O 3 Á2H 2 O, II, have been characterized by single-crystal X-ray diffraction, IR spectroscopy and elemental analysis (C, H and N) techniques. In addition, the intermolecular hydrogen-bonding interactions of compounds I and II have been investigated and quantified in detail on the basis of Hirshfeld surface analysis and fingerprint plots. Throughout the study, we use crystal engineering, which is based on modifications of the intermolecular interactions, thus offering a more comprehensive screening of the salt-cocrystal continuum in comparison with pure pK a analysis.
Cancer
is a major health risk in the modern society that requires
rapid, reliable, and inexpensive diagnostics. Because of the low abundance
of cancer DNA in biofluids, current detection methods require DNA
amplification. The amplification can be challenging; it provides only
relative quantification and extends time and cost of an assay. Herein,
we report a new oligonucleotide hybridization platform for amplification-free
detection of human cancer DNA. Using a large PEG-capture probe allows
rapid separation of the bound (mutant) versus unbound (wild type)
DNA. Next, a supramolecular hydrogel forming peptide attached to a
detection oligonucleotide probe serves as a signal amplification tool.
Having screened multiple short peptides and fluorophores, we identified
the system P1 + cyanine 3.5 that allows for sensitive quantitative
detection of mutation L858R in
EGFR
oncogene. The
peptide–fluorophore-based assay provides absolute target DNA
quantification at the detection limit of 20 ng cancer DNA versus >500
ng for Cy3.5-labeled oligonucleotide in only 1 hour.
Due to the inherent geometrical interdependencies of nucleic acid structures, the ability to engineer biosensors that rely on the specific interactions of these compounds is of considerable importance. Additionally, sensing or screening in a label-free fashion is a capability of these structures that can be readily achieved by exploiting the fluorescent component. In this work, the [AdH] 6 [V 10 O 28 ].4(H 2 O) (1) supramolecular structure is introduced using adenine and decavanadate moieties that allow probing of selectivity to specific nucleic acid binding events by optical changes. The structure of (1) is an alternating organic-inorganic hybrid architecture of cationic adeninium (AdH + ) ribbons and anionic decavanadate (DV)-water sheets. The luminescent screening and anticancer activity of compound (1) on the two human mammary carcinoma cell lines MDA-MB-231 and MCF7 were investigated using fluorescent microscopy and MTT assays, respectively. It was found that compound (1) is cell permeable with no toxicity below 12.5 mM concentration and moderate cytotoxicity at concentrations as high as 200 mM in human breast cancer cell lines, making it a useful tool to study the cell nucleus in real time.
A new solvent stimuli-responsive metallogel (VGel) was synthesized through the introduction of vanadium ions into an adenine (Ade) and BTC organogel, and its supramolecular self-assembly was investigated from a computational viewpoint.
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