Lacustrine carbonate chimneys are striking, metre-scale constructions. If these were bioinfluenced constructions, they could be priority targets in the search for early and extraterrestrial microbial life. However, there are questions over whether such chimneys are built on a geobiological framework or are solely abiotic geomorphological features produced by mixing of lake and spring waters. Here, we use correlative microscopy to show that microbes were living around Pleistocene Mono Lake carbonate chimneys during their growth. A plausible interpretation, in line with some recent works by others on other lacustrine carbonates, is that benthic cyanobacteria and their associated extracellular organic material (EOM) formed tubular biofilms around rising sublacustrine spring vent waters, binding calcium ions and trapping and binding detrital silicate sediment. Decay of these biofilms would locally have increased calcium and carbonate ion activity, inducing calcite precipitation on and around the biofilms. Early manganese carbonate mineralisation was directly associated with cell walls, potentially related to microbial activity though the precise mechanism remains to be elucidated. Much of the calcite crystal growth was likely abiotic, and no strong evidence for either authigenic silicate growth or a clay mineral precursor framework was observed. Nevertheless, it seems likely that the biofilms provided initial sites for calcite nucleation and encouraged the primary organised crystal growth. We suggest that the nano-, micro- and macroscale fabrics of these Pleistocene Mono Lake chimneys were affected by the presence of centimetre-thick tubular and vertically stacked calcifying microbial mats. Such carbonate chimneys represent a promising macroscale target in the exploration for ancient or extraterrestrial life.
Laboratory scale microcosm studies were conducted to determine the efficacy of controlled in situ saprobization of lake sediments as one opportunity for deacidification of artificial shallow lakes resulting from open cast lignite mining located in southeast Germany. Under lasting anoxic conditions iron and sulfate were removed from the lake water as a result of microbial iron-and sulfate reduction together with a subsequent precipitation of insoluble sulfide minerals to the lake sediment. The 2 L closed system microcosms were made up of a model of the sediment/ water interface. They were filled with lake water and sediment and treated subsequently with different organic and/or inorganic carbon sources in combination with wheat straw. Just the water was characterized initially and finally 8 weeks later. The rise of pH together with acidity consumption was observed. In the microcosms treated with wheat straw and pyruvate, ethanol, Carbokalk, or Pfezi-granula the pH rose to 5.5 and 7.0, respectively, and iron-and sulfate reduction were observed. With wheat straw and ethanol or Pfezi-granula sulfate concentrations decreased from initial concentrations of 11.5-13.5 mmol L -1 to final concentrations of < 3 mmol L -1 . However, the iron concentration decreased significantly to a value of 0.01 mmol L -1 exclusively with Pfezi-granula and wheat straw. For the most reactive microcosms geochemical equilibrium calculations suggest precipitation of different sulfide minerals. The critical revision of the results obtained from this study indicate that ethanol or Carbokalk together with wheat straw are suitable for further upscaling in largerscale microcosms.
What determines variation in genome size, gene content and genetic diversity at the broadest scales across the tree of life? Much of the existing work contrasts eukaryotes with prokaryotes, the latter represented mainly by Bacteria. But any general theory of genome evolution must also account for the Archaea, a diverse and ecologically important group of prokaryotes that represent one of the primary domains of cellular life. Here, we survey the extant diversity of Bacteria and Archaea, and ask whether the general principles of genome evolution deduced from the study of Bacteria and eukaryotes also apply to the archaeal domain. Although Bacteria and Archaea share a common prokaryotic genome architecture, the extant diversity of Bacteria appears to be much higher than that of Archaea. Compared with Archaea, Bacteria also show much greater genome-level specialisation to specific ecological niches, including parasitism and endosymbiosis. The reasons for these differences in long-term diversification rates are unclear, but might be related to fundamental differences in informational processing machineries and cell biological features that may favour archaeal diversification in harsher or more energy-limited environments. Finally, phylogenomic analyses suggest that the first Archaea were anaerobic autotrophs that evolved on the early Earth.
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