Stony coral tissue loss disease (SCTLD) was initially documented in Florida in 2014 and outbreaks with similar characteristics have since appeared in disparate areas throughout the northern Caribbean, causing significant declines in coral communities. SCTLD is characterized by focal or multifocal lesions of denuded skeleton caused by rapid tissue loss and affects at least 22 reef-building species of Caribbean corals. A tissue-loss disease consistent with the case definition of SCTLD was first observed in the U.S. Virgin Islands (USVI) in January of 2019 off the south shore of St. Thomas at Flat Cay. The objective of the present study was to characterize species susceptibility to the disease present in St. Thomas in a controlled laboratory transmission experiment. Fragments of six species of corals (Colpophyllia natans, Montastraea cavernosa, Orbicella annularis, Porites astreoides, Pseudodiploria strigosa, and Siderastrea siderea) were simultaneously incubated with (but did not physically contact) SCTLD-affected colonies of Diploria labyrinthiformis and monitored for lesion appearance over an 8 day experimental period. Paired fragments from each corresponding coral genotype were equivalently exposed to apparently healthy colonies of D. labyrinthiformis to serve as controls; none of these fragments developed lesions throughout the experiment. When tissue-loss lesions appeared and progressed in a disease treatment, the affected coral fragment, and its corresponding control genet, were removed and preserved for future analysis. Based on measures including disease prevalence and incidence, relative risk of lesion development, and lesion progression rates, O. annularis, C. natans, and S. siderea showed the greatest susceptibility to SCTLD in the USVI. These species exhibited earlier average development of lesions, higher relative risk of lesion development, greater lesion prevalence, and faster lesion progression rates compared with the other species, some of which are considered to be more susceptible based on field observations (e.g., P. strigosa). The average transmission rate in the present study was comparable to tank studies in Florida, even though disease donor species differed. Our findings suggest that the tissue loss disease affecting reefs of the USVI has a similar epizootiology to that observed in other regions, particularly Florida.

Stony coral tissue loss disease (SCTLD) was first observed in the United States Virgin Islands in January 2019 on a reef at Flat Cay off the island of St. Thomas. A year after its emergence, the disease had spread to several reefs around St. Thomas causing significant declines in overall coral cover. Rates of tissue loss are an important metric in the study of coral disease ecology, as they can inform many aspects of etiology such as disease susceptibility and resistance among species, and provide critical parameters for modeling the effects of disease among heterogenous reef communities. The present study quantified tissue loss rates attributed to SCTLD among six abundant reef building species (Colpophyllia natans, Montastraea cavernosa, Diploria labyrinthiformis, Pseudodiploria strigosa, Orbicella annularis, and Porites astreoides). Field-based 3D models of diseased corals, taken approximately weekly, indicated that the absolute rates of tissue loss from SCTLD slowed through time, corresponding with the accumulation of thermal stress that led to mass bleaching. Absolute tissue loss rates were comparable among species prior to the bleaching event but diverged during and remained different after the bleaching event. Proportional tissue loss rates did not vary among species or through time, but there was considerable variability among M. cavernosa colonies. SCTLD poses a significant threat to reefs across the Caribbean due to its persistence through time, wide range of susceptible coral species, and unprecedented tissue loss rates. Intervention and management efforts should be increased during and immediately following thermal stress events in order maximize resource distribution when disease prevalence is decreased.

The resilience of coral reefs is dependent on the ability of corals to settle after disturbances. While crustose coralline algae (CCA) are considered important substrates for coral settlement, it remains unclear whether coral larvae respond to CCA metabolites and microbial cues when selecting sites for attachment and metamorphosis. This study tested the settlement preferences of an abundant coral species (Acropora cytherea) against six different CCA species from three habitats (exposed, subcryptic and cryptic), and compared these preferences with the metabolome and microbiome characterizing the CCA. While all CCA species induced settlement, only one species (Titanoderma prototypum) significantly promoted settlement on the CCA surface, rather than on nearby dead coral or plastic surfaces. This species had a very distinct bacterial community and metabolomic fingerprint. Furthermore, coral settlement rates and the CCA microbiome and metabolome were specific to the CCA preferred habitat, suggesting that microbes and/or chemicals serve as environmental indicators for coral larvae. Several amplicon sequence variants and two lipid classes—glycoglycerolipids and betaine lipids—present in T. prototypum were identified as potential omic cues influencing coral settlement. These results support that the distinct microbiome and metabolome of T. prototypum may promote the settlement and attachment of coral larvae.