To minimize the accelerating amount of time invested on the biomedical literature search, numerous approaches for automated knowledge extraction have been proposed. Relation extraction is one such task where semantic relations between the entities are identified from the free text. In the biomedical domain, extraction of regulatory pathways, metabolic processes, adverse drug reaction or disease models necessitates knowledge from the individual relations, for example, physical or regulatory interactions between genes, proteins, drugs, chemical, disease or phenotype. Results: In this paper, we study the relation extraction task from three major biomedical and clinical tasks, namely drug-drug interaction, protein-protein interaction, and medical concept relation extraction. Towards this, we model the relation extraction problem in a multi-task learning (MTL) framework, and introduce for the first time the concept of structured self-attentive network complemented with the adversarial learning approach for the prediction of relationships from the biomedical and clinical text. The fundamental notion of MTL is to simultaneously learn multiple problems together by utilizing the concepts of the shared representation. Additionally, we also generate the highly efficient single task model which exploits the shortest dependency path embedding learned over the attentive gated recurrent unit to compare our proposed MTL models. The framework we propose significantly improves over all the baselines (deep learning techniques) and single-task models for predicting the relationships, without compromising on the performance of all the tasks.
Web page segmentation (WPS) aims to break a web page into different segments with coherent intra- and inter-semantics. By evidencing the morpho-dispositional semantics of a web page, WPS has traditionally been used to demarcate informative from non-informative content, but it has also evidenced its key role within the context of non-linear access to web information for visually impaired people. For that purpose, a great deal of ad hoc solutions have been proposed that rely on visual, logical, and/or text cues. However, such methodologies highly depend on manually tuned heuristics and are parameter-dependent. To overcome these drawbacks, principled frameworks have been proposed that provide the theoretical bases to achieve optimal solutions. However, existing methodologies only combine few discriminant features and do not define strategies to automatically select the optimal number of segments. In this article, we present a multi-objective clustering technique called MCS that relies on \( K \) -means, in which (1) visual, logical, and text cues are all combined in a early fusion manner and (2) an evolutionary process automatically discovers the optimal number of clusters (segments) as well as the correct positioning of seeds. As such, our proposal is parameter-free, combines many different modalities, does not depend on manually tuned heuristics, and can be run on any web page without any constraint. An exhaustive evaluation over two different tasks, where (1) the number of segments must be discovered or (2) the number of clusters is fixed with respect to the task at hand, shows that MCS drastically improves over most competitive and up-to-date algorithms for a wide variety of external and internal validation indices. In particular, results clearly evidence the impact of the visual and logical modalities towards segmentation performance.
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