This study examines the capacity to support the cumulative effects assessment and management for watersheds. The research is set in the Lower Fraser River Basin, a densely populated sub-watershed in British Columbia's lower mainland. Eight requirements or requisites for the watershed cumulative effects assessment and management are applied to evaluate current capacity for implementation in the Lower Fraser, and to identify the areas in need of capacity development. Results show that advancing watershed cumulative effects assessment and management requires not only good science but also leadership in the coordination of monitoring programs, and in ensuring the appropriate incentives and penalties for engagement and nonengagement. The lack of leadership in this regard is the result of existing governance structures arranged around the political boundaries, which have produced over time multiple agencies and jurisdictional fragmentation. Notwithstanding this, we argue that the watershed is the most appropriate scale for assessing and managing the cumulative effects to complex ecosystems.