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Subsidence of organic soils in the Sacramento-San Joaquin Delta threatens sustainability of the California (USA) water supply system and agriculture. Land-surface elevation data were collected to assess present-day subsidence rates and evaluate rice as a land use for subsidence mitigation. To depict Delta-wide present-day rates of subsidence, the previously developed SUBCALC model was refined and calibrated using recent data for CO2 emissions and land-surface elevation changes measured at extensometers. Land-surface elevation change data were evaluated relative to indirect estimates of subsidence and accretion using carbon and nitrogen flux data for rice cultivation. Extensometer and leveling data demonstrate seasonal variations in land-surface elevations associated with groundwater-level fluctuations and inelastic subsidence rates of 0.5–0.8 cm yr–1. Calibration of the SUBCALC model indicated accuracy of ±0.10 cm yr–1 where depth to groundwater, soil organic matter content and temperature are known. Regional estimates of subsidence range from <0.3 to >1.8 cm yr–1. The primary uncertainty is the distribution of soil organic matter content which results in spatial averaging in the mapping of subsidence rates. Analysis of leveling and extensometer data in rice fields resulted in an estimated accretion rate of 0.02–0.8 cm yr–1. These values generally agreed with indirect estimates based on carbon fluxes and nitrogen mineralization, thus preliminarily demonstrating that rice will stop or greatly reduce subsidence. Areas below elevations of –2 m are candidate areas for implementation of mitigation measures such as rice because there is active subsidence occurring at rates greater than 0.4 cm yr–1.

rn Samples of shallow groundwater that underlies much of the irrigated area in the western San Joaquin Valley, CA, were analyzed for various major ions and trace elements, including selenium. Concentrations of the major ions generally were similar for groundwater collected in the two primary geologic zones-the alluvial fan and basin trough. Selenium concentrations are significantly (a = 0.05) higher in the groundwater of the alluvial-fan zone than in that of the basin-trough zone. The concentrations of oxyanion trace elements were significantly correlated (a = 0.05) with groundwater salinity, but the correlations between selenium and salinity and between molybdenum and salinity were significantly different (a = 0.05) in the alluvial-fan geologic zone compared with those in the basin-trough geologic zone. The evidence suggests that the main factors affecting selenium concentrations in the shallow groundwater are the degree of groundwater salinity and the geologic source of the alluvial soil material.