Iodine is commonly used to speed the equilibration of Wittig cis/trans alkene products. This study uses computational chemistry to study the catalyzed isomerization mechanism in detail for seven different examples of 1,2-disubstituted alkenes. We find that the iodo intermediates of the conventional three-step reaction path are weakly stable, bound by less than 7 kJ mol(-1) in five cases and nonexistent in the other two. These variations in relative stability appear to be closely related to the degree of conjugation interruption in the alkene upon attachment of iodine. The rate-determining reaction barrier always occurs in the middle step, the internal rotation of the iodo intermediate, and the variations in the barrier heights are dictated by varying levels of steric hindrance in the seven cases. Regiospecificity of I-atom addition and noticeable hyperconjugative effects are discussed. Comparisons between various theoretical approximations are performed to demonstrate the great difficulty in obtaining accurate results for iodine-atom bond-forming and bond-breaking energies.

alpha- and beta-tripyrrinone isomers (), and a C(2) symmetric hexapyrrole () were isolated from the oxidation of meso-perfluorophenyl tripyrrane (and meso-2,6-dichlorophenyl tripyrrane ) with DDQ under aerobic conditions, and the structure of was determined by X-ray crystallographic analysis.

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We have used density functional theory and ab initio methods to study different mechanistic possibilities for the formation of decamethyldizincocene from the reaction between decamethylzincocene and diethylzinc. Our results suggest that decamethyldizincocene could form from the combination of two pentamethylcyclopentadienylzinc radicals. More importantly, our data show that homolytic dissociation of decamethylzincocene into pentamethylcyclopentadienylzinc and pentamethylcyclopentadienyl radicals is 6.7 kcal/mol less costly than the analogous dissociation of zincocene. If such an energy difference is coupled with the fact that the activation barrier to form the half-sandwich product pentamethylcyclopentadienylethylzinc is 11.8 kcal/mol more costly than to form cyclopentadienylethylzinc, we can rationalize why dizincocene does not form experimentally.

Computational methods were used to study the surprising 2004 synthesis of decamethyldizincocene, Zn2(η(5)-C5Me5)2, which was the first molecule to have a direct, unbridged bond between two first-row transition metals. The computational results show that the methyl groups of decamethylzincocene, Zn(η(5)-C5Me5)(η(1)-C5Me5), affect the transition-state stability of its reaction with ZnEt2 (or ZnPh2) through steric hindrance, and this could possibly allow a counter-reaction, the homolytic dissociation of Zn(η(5)-C5Me5)(η(1)-C5Me5) into Zn(η(5)-C5Me5)(•) and (η(1)-C5Me5)(•), to occur, and because no such steric hindrance occurs when zincocene, Zn(η(5)-C5H5)(η(1)-C5H5), is used as a reactant, its dissociation never occurs regardless of what ZnR2 reagent is used.