The synthesis and structural flexibility of the metal-organic frameworks M 2 (2,6-ndc) 2 (dabco) (DUT-8(M), M ¼ Ni, Co, Cu, Zn; 2,6-ndc ¼ 2,6-naphthalenedicarboxylate, dabco ¼ 1,4-diazabicyclo[2.2.2] octane) as well as their characterization by gas adsorption, 129 Xe NMR and 13 C MAS NMR spectroscopy are described. Depending on the integrated metal atom the compounds show reversible (DUT-8(Ni), DUT-8(Co)), non-reversible (DUT-8(Zn)) or no (DUT-8(Cu)) structural transformation upon solvent removal and/or physisorption of several gases. DUT-8(Co) exhibits a similar structural transformation by solvent removal and adsorption behavior as observed for DUT-8(Ni). DUT-8(Zn) undergoes an irreversible structural change caused by solvent removal. The non-flexible copper containing MOF reveals the best performance concerning porosity and gas storage capacities within the DUT-8 series. Xenon adsorption studies combined with 129 Xe NMR spectroscopy are used to study the flexibility of the DUT-8 compounds. 129 Xe chemical shift and line width strongly depend on the metal atom. Solid-state 13 C NMR spectroscopy has been applied in order to further characterize the organic parts of the DUT-8 frameworks. While DUT-8(Ni) exhibits narrow, well-resolved lines in its ''as made'' state, the signals of are broadened and shifted over an unusually wide chemical shift range (À72 to 717 ppm). No detectable signals are found in DUT-8(Cu) indicating significantly changed internal dynamics compared to and .
The transmembrane DNA-binding protein CadC of E. coli, a representative of the ToxR-like receptor family, combines input and effector domains for signal sensing and transcriptional activation, respectively, in a single protein, thus representing one of the simplest signalling systems. At acidic pH in a lysine-rich environment, CadC activates the transcription of the cadBA operon through recruitment of the RNA polymerase (RNAP) to the two cadBA promoter sites, Cad1 and Cad2, which are directly bound by CadC. However, the molecular details for its interaction with DNA have remained elusive. Here, we present the crystal structure of the CadC DNA-binding domain (DBD) and show that it adopts a winged helix-turn-helix fold. The interaction with the cadBA promoter site Cad1 is studied by using nuclear magnetic resonance (NMR) spectroscopy, biophysical methods and functional assays and reveals a preference for AT-rich regions. By mutational analysis we identify amino acids within the CadC DBD that are crucial for DNA-binding and functional activity. Experimentally derived structural models of the CadC-DNA complex indicate that the CadC DBD employs mainly non-sequence-specific over a few specific contacts. Our data provide molecular insights into the CadC-DNA interaction and suggest how CadC dimerization may provide high-affinity binding to the Cad1 promoter.
Here we study the optimum efficiency of the excitation of maximum quantum (MaxQ) coherence using analytical and numerical methods based on optimal control theory. The theoretical limit of the achievable MaxQ amplitude and the minimum time to achieve this limit are explored for a set of model systems consisting of up to five coupled spins. In addition to arbitrary pulse shapes, two simple pulse sequence families of practical interest are considered in the optimizations. Compared to conventional approaches, substantial gains were found both in terms of the achieved MaxQ amplitude and in pulse sequence durations. For a model system, theoretically predicted gains of a factor of three compared to the conventional pulse sequence were experimentally demonstrated. Motivated by the numerical results, also two novel analytical transfer schemes were found: Compared to conventional approaches based on non-selective pulses and delays, double-quantum coherence in two-spin systems can be created twice as fast using isotropic mixing and hard spin-selective pulses. Also it is proved that in a chain of three weakly coupled spins with the same coupling constants, triple-quantum coherence can be created in a time-optimal fashion using so-called geodesic pulses.
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