The distribution and accumulation of trace metals in the sediments of the Cochin estuary during the pre-monsoon, monsoon and post-monsoon periods were investigated. Sediment samples from 14 locations were collected and analysed for the metal contents (Mg, Cr, Mn, Fe, Co, Ni, Cu, Zn, Cd and Pb), organic carbon, total nitrogen, total sulphur and grain size. The data were processed using statistical tools like correlation, factor and cluster analysis. The study revealed an enrichment of Cd and Zn in the study area particularly at station 2, which is confirmed by enrichment factor, contamination factor and geoaccumulation index. The factor analysis revealed that the source of Cd and Zn may be same. The study indicated that the spatial variation for the metals like Mg, Cr, Fe, Co, Ni, Cu, Zn, Cd and Pb were predominant unlike Mn which shows a temporal variation. The strong association of trace metals with Fe and Mn hydroxides and oxides are prominent along the Cochin estuary. The anthropogenic inputs of industrial effluents mainly control the trace metals enrichment in the Cochin estuary.

Variability of nature and composition of organic matter in the surficial sediments of mangrove and estuarine systems of Cochin were investigated. Assessment of biochemical composition and elements such as carbon, nitrogen and sulphur were employed for this. Irrespective of the higher content of total organic matter, the labile organic matter was very low in both mangrove and estuarine sediments. Concentrations of biochemical compounds were comparatively higher in mangrove sediments. Total lipids were the dominant class among labile organic compounds in both mangrove and estuarine sediments contributing 51.4% and 45.3%, respectively. Protein to carbohydrate ratio was higher in estuarine sediments when compared to mangroves, indicating low dead organic matter accumulation, probably due to the strong hydrodynamic conditions in estuaries. Correlation analysis showed that sediment texture had no significant correlation with any of the sedimentary parameters in mangroves, whereas in estuaries, it showed significant correlations with most of the sedimentary parameters. Principal component analysis indicated three different dominant processes in mangroves namely mangrove litter addition, diagenesis and other geochemical process like siltation and sorption/desorption, while in estuaries the dominant process seems to be diagenesis.

The phosphorus fractions in three tropical mangrove systems of Cochin region were analysed by sequential extraction method. Iron-bound phosphorus was the major fraction in the first two stations, while station 3 was exclusively dominated by calcium-bound phosphorus. Compared to other stations, about tenfold increase in total phosphorus content was observed at station 3. This station is a congregation of communally breeding birds, and there is accumulation of bird guano. Mineralogical analysis showed the presence of monetite, a thermodynamically metastable calcium phosphate mineral, in this unique system. The excreta and carcass of the birds in this sanctuary seems to be the reason for the formation of monetite, which is favoured by periodic fluctuations in redox potential. The high mass percentages of calcium and phosphorus by XRF and SEM-EDS analysis confirm the existence of calcium phosphate mineral at station 3. First two stations did not show any noticeable difference in phosphorus fractions and inorganic fractions constituted to about 65% of total phosphorus. But at station 3, inorganic fractions were about 92%. Low C:P ratios and low organic phosphorus content indicated active mineralisation of phosphorus at station 3. Bioavailable fractions of phosphorus at stations 1 and 2 were about 75%, whereas 98% of the total phosphorus was bioavailable at station 3. Since the bulk of the total phosphorus is bioavailable, these mangrove sediments have the potential to act as source of phosphorus to the overlying waters.

The distribution and accumulation of the rare earth elements (REE) in the sediments of the Cochin Estuary and adjacent continental shelf were investigated. The rare earth elements like La, Ce, Pr, Nd, Sm, Eu, Gd, Tb, Dy, Ho, Er, Tm, Yb, Lu and the heavy metals like Mg, V, Cr, Mn, Fe, Cu, Zn, U, Th were analysed by using standard analytical methods. The Post-Archean Australian Shale composition was used to normalise the rare earth elements. It was found that the sediments were more enriched with the lighter rare earth elements than the heavier ones. The positive correlation between the concentrations of REE, Fe and Mn could explain the precipitation of oxyhydroxides in the study area. The factor analysis and correlation analysis suggest common sources of origin for the REEs. From the Ce-anomalies calculated, it was found that an oxic environment predominates in all stations except the station No. 2. The Eu-anomaly gave an idea that the origin of REEs may be from the feldspar. The parameters like total organic carbon, U/Th ratio, authigenic U, Cu/Zn, V/Cr ratios revealed the oxic environment and thus the depositional behaviour of REEs in the region.

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