Mitochondria are all-important organelles of eukaryotic cells since they are involved in processes associated with cellular mortality and human diseases. Therefore, trustworthy techniques are highly required for the identification of new mitochondrial proteins. We propose Mito-GSAAC system for prediction of mitochondrial proteins. The aim of this work is to investigate an effective feature extraction strategy and to develop an ensemble approach that can better exploit the advantages of this feature extraction strategy for mitochondria classification. We investigate four kinds of protein representations for prediction of mitochondrial proteins: amino acid composition, dipeptide composition, pseudo amino acid composition, and split amino acid composition (SAAC). Individual classifiers such as support vector machine (SVM), k-nearest neighbor, multilayer perceptron, random forest, AdaBoost, and bagging are first trained. An ensemble classifier is then built using genetic programming (GP) for evolving a complex but effective decision space from the individual decision spaces of the trained classifiers. The highest prediction performance for Jackknife test is 92.62% using GP-based ensemble classifier on SAAC features, which is the highest accuracy, reported so far on the Mitochondria dataset being used. While on the Malaria Parasite Mitochondria dataset, the highest accuracy is obtained by SVM using SAAC and it is further enhanced to 93.21% using GP-based ensemble. It is observed that SAAC has better discrimination power for mitochondria prediction over the rest of the feature extraction strategies. Thus, the improved prediction performance is largely due to the better capability of SAAC for discriminating between mitochondria and non-mitochondria proteins at the N and C terminus and the effective combination capability of GP. Mito-GSAAC can be accessed at http://111.68.99.218/Mito-GSAAC . It is expected that the novel approach and the accompanied predictor will have a major impact to Molecular Cell Biology, Proteomics, Bioinformatics, System Biology, and Drug Development.
On the rise of distributed computing technologies, video big data analytics in the cloud have attracted researchers and practitioners' attention. The current technology and market trends demand an efficient framework for video big data analytics. However, the current work is too limited to provide an architecture on video big data analytics in the cloud, including managing and analyzing video big data, the challenges, and opportunities. This study proposes a service-oriented layered reference architecture for intelligent video big data analytics in the cloud. Finally, we identify and articulate several open research issues and challenges, which have been raised by the deployment of big data technologies in the cloud for video big data analytics. This paper provides the research studies and technologies advancing the video analyses in the era of big data and cloud computing. This is the first study that presents the generalized view of the video big data analytics in the cloud to the best of our knowledge. Keywords: big data • intelligent video analytics • cloud-based video analytics system • video analytics review • deep learning • distributed computing • intermediate results orchestration • cloud computing.
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