An x-ray crystallographic analysis was carried out for Boc-(Aib-DeltaZPhe)4-Aib-OMe (1: Boc = t-butoxycarbonyl; Aib = alpha-aminoisobutyric acid; DeltaZPhe = Z-alpha,beta-didehydrophenylalanine) to provide the precise conformational parameters of the octapeptide segment -(Aib-DeltaZPhe)4-. Peptide 1 adopted a typical 3(10)-helical conformation characterized by = +/-55.8 degrees (50 degrees -65 degrees), = +/-26.7 degrees (15 degrees -45 degrees), and = +/-179.5 degrees (168 degrees -188 degrees) for the average values of the -(Aib-DeltaZPhe)4- segment (the range of the eight values). The 3(10)-helix contains 3.1 residues per turn, being close to the "perfect 3(10)-helix" characterized by 3.0 residues per turn. NMR and Fourier transform infrared (FTIR) spectroscopy revealed that the 3(10)-helical conformation at the atomic resolution is essentially maintained in solution. Energy minimization of peptide 1 by semiempirical molecular orbital calculation converged to a 3(10)-helical conformation similar to the x-ray crystallographic 3(10)-helix. The preference for a 3(10)-helix in the -(Aib-DeltaZPhe)4- segment is ascribed to strong inducers of the 3(10)-helix inherent in Aib and DeltaZPhe residues-in particular, the Aib residues tend to stabilize a 3(10)-helix more effectively. Therefore, the -(Aib-DeltaZPhe)4- segment is useful to rationally design an optically inactive 3(10)-helical backbone, which will be of great importance to provide novel insights into noncovalent and covalent chiral interactions of a helical peptide with a chiral molecule.
An X-ray crystallographic analysis was carried out for Boc-(Aib-∆ Z Phe) 2 -Aib-OMe 1 and Boc--Pro-(Aib-∆ Z Phe) 2 -Aib-OMe 2 (Aib = α-aminoisobutyric acid; ∆ Z Phe = α,β-dehydrophenylalanine; Boc = tert-butoxycarbonyl; OMe = methoxy) to provide detailed conformational data for oligopeptides possessing an -(Aib-∆ Z Phe) 2 -segment. Both peptides adopted a typical 3 10 -helical conformation characterized by <φ> = 52.8Њ, <ψ> = 29.3Њ, and <ω> = Ϫ173.8Њ for the average values of the four residues of the -(Aib-∆ Z Phe) 2 -segment in peptide 1, and <φ> = 54Њ, <ψ> = 27Њ, and <ω> = Ϫ175Њ for those in peptide 2. The preference for a 3 10 -helix in the -(Aib-∆ Z Phe) 2 -segment is ascribed to the presence of Aib and ∆ Z Phe residues being strong inducers for the formation of a 3 10 -helix. In peptide 2, the Nterminal -Pro residue adopted a semiextended conformation, leading to a left-handed screw sense for the following achiral segment. This result was also supported by conformational energy calculation, in which the -Pro residue leading to a left-handed 3 10 -helical segment prefers a semiextended conformation rather than a right-handed helical conformation.
scite is a Brooklyn-based organization that helps researchers better discover and understand research articles through Smart Citations–citations that display the context of the citation and describe whether the article provides supporting or contrasting evidence. scite is used by students and researchers from around the world and is funded in part by the National Science Foundation and the National Institute on Drug Abuse of the National Institutes of Health.