In yeast and mammals, the AAA ATPase Vps4p/SKD1 (for Vacuolar protein sorting 4/SUPPRESSOR OF K þ TRANSPORT GROWTH DEFECT1) is required for the endosomal sorting of secretory and endocytic cargo. We identified a VPS4/SKD1 homolog in Arabidopsis thaliana, which localizes to the cytoplasm and to multivesicular endosomes. In addition, green fluorescent protein-SKD1 colocalizes on multivesicular bodies with fluorescent fusion protein endosomal Rab GTPases, such as ARA6/RabF1, RHA1/RabF2a, and ARA7/RabF2b, and with the endocytic marker FM4-64. The expression of SKD1 E232Q , an ATPase-deficient version of SKD1, induces alterations in the endosomal system of tobacco (Nicotiana tabacum) Bright Yellow 2 cells and ultimately leads to cell death. The inducible expression of SKD1 E232Q in Arabidopsis resulted in enlarged endosomes with a reduced number of internal vesicles. In a yeast two-hybrid screen using Arabidopsis SKD1 as bait, we isolated a putative homolog of mammalian LYST-INTERACTING PROTEIN5 (LIP5)/SKD1 BINDING PROTEIN1 and yeast Vta1p (for Vps twenty associated 1 protein). Arabidopsis LIP5 acts as a positive regulator of SKD1 by increasing fourfold to fivefold its in vitro ATPase activity. We isolated a knockout homozygous Arabidopsis mutant line with a T-DNA insertion in LIP5. lip5 plants are viable and show no phenotypic alterations under normal growth conditions, suggesting that basal SKD1 ATPase activity is sufficient for plant development and growth.

SUMMARY Tools capable of imaging and perturbing mechanical signaling pathways with fine spatiotemporal resolution have been elusive despite their importance in diverse cellular processes. The challenge in developing a mechanogenetic toolkit (i.e. selective and quantitative activation of genetically encoded mechanoreceptors) stems from the fact that many mechanically-activated processes are localized in space and time, yet additionally require mechanical loading to become activated. To address this challenge, we synthesized magnetoplasmonic nanoparticles that can image, localize, and mechanically load targeted proteins with high spatiotemporal resolution. We demonstrate their utility by investigating the cell surface activation of two mechanoreceptors: Notch and E-cadherin. By measuring cellular responses to a spectrum of spatial, chemical, temporal, and mechanical inputs at the single molecule and single cell level, we reveal how spatial segregation and mechanical force cooperate to direct receptor activation dynamics. This generalizable technique can be used to control and understand diverse mechanosensitive processes in cell signaling.

Plasma membrane proteins internalized by endocytosis and targeted for degradation are sorted into lumenal vesicles of multivesicular bodies (MVBs) by the endosomal sorting complexes required for transport (ESCRT) machinery. Here, we show that the Arabidopsis thaliana ESCRT-related CHARGED MULTIVESICULAR BODY PROTEIN/CHROMATIN MODIFYING PROTEIN1A (CHMP1A) and CHMP1B proteins are essential for embryo and seedling development. Double homozygous chmp1a chmp1b mutant embryos showed limited polar differentiation and failed to establish bilateral symmetry. Mutant seedlings show disorganized apical meristems and rudimentary true leaves with clustered stomata and abnormal vein patterns. Mutant embryos failed to establish normal auxin gradients. Three proteins involved in auxin transport, PINFORMED1 (PIN1), PIN2, and AUXIN-RESISTANT1 (AUX1) mislocalized to the vacuolar membrane of the mutant. PIN1 was detected in MVB lumenal vesicles of control cells but remained in the limiting membrane of chmp1a chmp1b MVBs. The chmp1a chmp1b mutant forms significantly fewer MVB lumenal vesicles than the wild type. Furthermore, CHMP1A interacts in vitro with the ESCRT-related proteins At SKD1 and At LIP5. Thus, Arabidopsis CHMP1A and B are ESCRT-related proteins with conserved endosomal functions, and the auxin carriers PIN1, PIN2, and AUX1 are ESCRT cargo proteins in the MVB sorting pathway.

We have mapped the formation of tars during white oak thermochemical conversion using a bench scale laminar entrained flow reactor (LEFR). White oak particles (80 mesh, <180 μm) were pyrolyzed under conditions not limited by heat transfer. Measurements were made with residence times of 0.2, 0.4, 0.6, and 0.8 s, between 500 and 900 at 100 °C increments, and with residence times of 1 s at temperature from 450 to 950 °C at 25 °C increments. Products were monitored with a molecular beam mass spectrometer (MBMS), and the mass spectra were analyzed using model-free multivariate analysis (multivariate curve resolution). Six groups of correlated masses were identified that suggest the mechanisms of pyrolysis and gasification. The first group of masses (lowest temperature) is associated with primary species from lignin and hemicellulose, followed by cellulose products. The next two groups (increasing temperature) are composed of secondary products resulting from the cracking of carbohydrate vapors and the cracking of lignin in the gas or solid phase. Molecular weight growth products are seen in the next two groups including substituted aromatic compounds in the fifth group and polycyclic aromatic hydrocarbons (PAHs) in the sixth group. The results of this study show that as the temperature of pyrolysis is increased, the molecular weight of the tars decreases up to 750 °C, because the pyrolysis vapors are cracked. As the temperature increases beyond 750 °C, molecular weight growth is seen with increasing temperature. The analysis also shows that as the temperature increases from 450 to 950 °C, oxygen is lost from the tars and converted into CO and CO2. The char samples were collected and analyzed with light and electron microscopy. This analysis revealed that micropores develop in the cell wall around 550 °C and increase in size and coalesce into a cenosphere morphology with increasing temperature. Above 850 °C, these cenospheres appear to rupture, releasing their contents into the gas phase. This rupture event correlates with increased MBMS signals from PAH-associated masses.

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