Homogeneous immunoassays are prevalent tools for the detection of antigens. The major advantage over heterogeneous immunoassays is the absence of numerous incubation and washing steps, reducing the assay time and allowing rapid on-site detection of antigens (e.g., toxins and pollutants). The simple experimental setup of a homogeneous immunoassay also allows a robust analysis even when performed by non-laboratory-trained personnel. Here we present a homogeneous immunoassay for the rapid determination of antigens. As a proof of concept, a phosphorylation-specific anti-human tau monoclonal antibody was labeled with an acceptor and the corresponding peptide probe with a donor fluorophore. The analyte sample is spiked with a fixed amount of donor peptide before acceptor-labeled antibody is added leading to a donor fluorescence quenching. Thus the intensity of the fluorescence signal of the donor peptide probe depends on the concentration of the target antigen. The sequence of the donor peptide was optimized to lower its affinity to the antibody giving a higher response for the analyte antigen compared to the native epitope. This allowed a semiquantitative analysis of the antigen within only 90 s.

The specific interaction of peptides with proteins is often a key factor which determines biological activities. The determination of K(d) values of such interactions is commonly performed with fluorescence polarization. However, fluorescence polarization assays are prone to false-positive results due to the potential for non-specific interactions and only afford very low signal-to-background ratios. Here, we present as an alternative a fluorescence resonance energy transfer based quenching assay to measure peptide-protein interactions in solution. In a test setup where antimicrobial peptides were tested for their affinity towards the protein DnaK, the assay provided high specificity and good reproducibility and correlated with the results obtained by fluorescence polarization methods. Furthermore, we established a fast prescreening method which will allow a highly efficient screening of peptide libraries by reducing the amount of sample by 98% compared to conventional fluorescence polarization assays.

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Here, we present a fast mix-and-measure immunoassay for the specific semiquantitative detection of His-tagged proteins, for example in E. coli cell lysate. The assay is based on Förster resonance energy transfer (FRET) between a lanthanide dye-labeled low-affinity His-peptide and an acceptor-labeled anti-His-tag antibody. The targeted His-tag protein in the sample displaces the donor-labeled peptide and leads to a concentration-dependent time-resolved fluorescence signal. The assay has a total assay time of less than two minutes including sample preparation. The assay recognizes both, N- and C-terminally tagged proteins. The detection limit is comparable to those obtained in SDS-PAGE or Western Blot, which are used as standard methods for the characterization of His-tag protein expression. Additionally, we demonstrate a full compatibility of the developed assay to cell lysate, and a correlation to detectable bands in a western blot application. In conclusion, this fast, sensitive, specific and affordable mix-and-measure assay provides a timesaving and user-friendly way to quantify recombinant protein expression. It substantially reduces the workload for recombinant protein detection, especially when His-tag-protein-containing fractions in manual chromatographic purifications have to be identified.