No abstract

Rotaviruses (RV), especially Rotavirus A (RVA), are globally recognized as pathogens causing neonatal diarrhea, but they also affect intensive animal farming. However, the knowledge on their significance in wildlife is rather limited. The aim of the study was to unveil the prevalence, molecular epidemiology, and genetic diversity of RVA strains circulating in the red fox (Vulpes vulpes) population in Croatia. From 2018 to 2019, 370 fecal samples from fox carcasses hunted for rabies monitoring were collected. All samples were first tested using a VP2 real-time RT-PCR; in the subsequent course, positives were subjected to VP7 and VP4 genotyping. The results revealed an RVA prevalence of 14.9%, while the circulating RVA strains showed a remarkable genetic diversity in terms of 11 G and nine P genotypes, among which one G and three P were tentatively identified as novel. In total, eight genotype combinations were detected: G8P[14], G9P[3], G9P[23], G10P[11], G10P[3], G11P[13], G15P[21], and G?P[?]. The results suggest a complex background of previous interspecies transmission events, shedding new light on the potential influence of foxes in RVA epidemiology. Their role as potential reservoirs of broad range of RVA genotypes, usually considered typical solely of domestic animals and humans, cannot be dismissed.

Carnivores tend to exhibit a lack of (or less pronounced) genetic structure at continental scales in both a geographic and temporal sense using various mitochondrial DNA markers on modern and/or ancient specimens. This tends to confound the identification of refugial areas and post-glacial colonization patterns in this group. In this study we used Genotyping-by-Sequencing (GBS) to reconstruct the phylogeographic history of a widespread carnivore, the red fox (Vulpes vulpes), in Europe by investigating broad-scale patterns of genomic variation, differentiation and admixture amongst contemporary populations. Using 15,003 single nucleotide polymorphisms (SNPs) from 524 individuals allowed us to identify the importance of refugial regions for the red fox in terms of endemism (e.g. Iberia) and sources of post-glacial re-expansion (e.g. Carpathians and Balkans) across northern regions of the continent. In addition, we tested multiple post-glacial re-colonization scenarios of previously glaciated regions during the Last Glacial Maximum using an Approximate Bayesian Computation (ABC) approach. We identified the role of ancient and temporary land-bridges in the colonization of Scandinavia and the British Isles, with a natural colonization of Ireland deemed more likely than an ancient human-mediated introduction as has previously been proposed. Using genome-wide data has allowed us to tease apart broad-scale patterns of structure and diversity in a widespread carnivore in Europe that was not always evident from using more limited marker sets.

Carnivores tend to exhibit a lack of (or less pronounced) genetic structure at continental scales in both a geographic and temporal sense and this can confound the identification of post-glacial colonization patterns in this group. In this study we used genome-wide data (using genotyping by sequencing [GBS]) to reconstruct the phylo-

Intestinal parasites of dogs and cats may affect their health with a significant zoonotic risk to public health. Therefore, establishing an efficient control program should pass through the determination of the diversity, prevalence, and pathogenicity of those parasites. This study aimed to determine the prevalence of intestinal parasites in dogs and cats and proceed to infection comparisons between young and adult animals. The detection of parasites in fecal samples was determined using flotation and immunofluorescent methods across 320 dogs and 64 cats from the Kvarner region in Croatia. The prevalence was calculated for each detected parasite in its host. Differences in prevalence between young animals and adults were analyzed. Parasites were detected in 32 dogs and 34.4% of cats. In total, 12 different genera were detected; Giardia spp. was the most prevalent parasite in both species, infecting 24.7% and 18.8% of investigated dogs and cats, respectively. Cryptosporidium spp. and Toxocara cati had a prevalence of (18.4%) and (6.3%), respectively. Prevalences of Giardia spp., Cryptosporidium spp., and Cystoisospora spp. were significantly (P < 0.05) higher in puppies compared to adult dogs. Pentatrichomonas hominis (P. hominis) was detected in one puppy. In addition to the first report of P. hominis, a relatively high prevalence of intestinal parasites in dogs and cats in the Kvarner region of Croatia was recorded, posing a potential zoonotic risk.