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Abstract. Coccolithophores are calcifying marine phytoplankton of the class Prymnesiophyceae. They are considered to play an import role in the global carbon cycle through the production and export of organic carbon and calcite. We have compiled observations of global coccolithophore abundance from several existing databases as well as individual contributions of published and unpublished datasets. We make conservative estimates of carbon biomass using standardised conversion methods and provide estimates of uncertainty associated with these values. The quality-controlled database contains 57 321 individual observations at various taxonomic levels. This corresponds to 11 503 observations of total coccolithophore abundance and biomass. • S, with declines towards both the equator and the poles. Biomass estimates between the equator and 40•

Sydney Harbour is a global hotspot for marine and estuarine diversity. Despite its social, economic and biological value, the available knowledge has not previously been reviewed or synthesised. We systematically reviewed the published literature and consulted experts to establish our current understanding of the Harbour’s natural systems, identify knowledge gaps, and compare Sydney Harbour to other major estuaries worldwide. Of the 110 studies in our review, 81 focussed on ecology or biology, six on the chemistry, 10 on geology and 11 on oceanography. Subtidal rocky reef habitats were the most studied, with a focus on habitat forming macroalgae. In total 586 fish species have been recorded from the Harbour, which is high relative to other major estuaries worldwide. There has been a lack of process studies, and an almost complete absence of substantial time series that constrains our capacity to identify trends, environmental thresholds or major drivers of biotic interactions. We also highlight a lack of knowledge on the ecological functioning of Sydney Harbour, including studies on microbial communities. A sound understanding of the complexity, connectivity and dynamics underlying ecosystem functioning will allow further advances in management for the Harbour and for similarly modified estuaries around the world.

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Sydney Harbour is a hotspot for diversity. However, as with estuaries worldwide, its diversity and functioning faces increasing threats from urbanisation. This is the first synthesis of threats and impacts in Sydney Harbour. In total 200 studies were reviewed: 109 focussed on contamination, 58 on habitat modification, 11 addressed non-indigenous species (NIS) and eight investigated fisheries. Metal concentrations in sediments and seaweeds are among the highest recorded worldwide and organic contamination can also be high. Contamination is associated with increased abundances of opportunistic species, and changes in benthic community structure. The Harbour is also heavily invaded, but invaders’ ecological and economic impacts are poorly quantified. Communities within Sydney Harbour are significantly affected by extensive physical modification, with artificial structures supporting more NIS and lower diversity than their natural equivalents. We know little about the effects of fishing on the Harbour’s ecology, and although ocean warming along Sydney is among the fastest in the world, we know little about how the ecosystem will respond to warming. The interactive and cumulative effects of stressors on ecosystem functioning and services in the Harbour are largely unknown. Sustainable management of this iconic natural system requires that knowledge gaps are addressed and translated into coherent environmental plans.