The atomic force microscope (AFM) is a powerful tool for imaging individual biological molecules attached to a substrate and placed in aqueous solution. At present, however, it is limited by the speed at which it can successively record highly resolved images. We sought to increase markedly the scan speed of the AFM, so that in the future it can be used to study the dynamic behavior of biomolecules. For this purpose, we have developed a high-speed scanner, free of resonant vibrations up to 60 kHz, small cantilevers with high resonance frequencies (450 -650 kHz) and small spring constants (150 -280 pN͞nm), an objective-lens type of deflection detection device, and several electronic devices of wide bandwidth. Integration of these various devices has produced an AFM that can capture a 100 ؋ 100 pixel 2 image within 80 ms and therefore can generate a movie consisting of many successive images (80-ms intervals) of a sample in aqueous solution. This is demonstrated by imaging myosin V molecules moving on mica (see http:͞͞www.s.kanazawa-u.ac.jp͞phys͞biophys͞bmvmovie.htm). One of the advantages of the atomic force microscope (AFM) (1) is its capacity to image individual biomolecules in, say, a buffered solution containing ions at physiological concentrations (2, 3). Such capacity suggests that the instrument can be used to record the dynamic behavior of such molecules. In practice, however, only very slow processes can be recorded (2, 4-6), because commercially available AFMs require minutes to form an acceptable image, and many interesting biological processes occur at much higher rates. To understand, and overcome, the factors that limit the scanning rate of an AFM, we begin by considering relations between the characteristics of the constituting components.We consider only the ''tapping mode'' of AFM operation (Digital Instruments, Santa Barbara, CA). This is the mode suitable for imaging biological macromolecules, because vertical oscillation of the cantilever at (or near to) its resonance frequency reduces lateral forces between the tip and the sample (7). The oscillating tip briefly taps the surface at the bottom of each swing, resulting in a decrease in oscillation amplitude. During the x-y scan of the sample stage a feedback loop (see below) keeps this decrease (and hence the tapping force) constant; this is necessary for minimizing the deformation of soft samples. The error signal-the difference between a preset signal and the rms amplitude of the cantilever-is fed into a proportional-integraldifferential (PID) feedback circuit. The PID output is amplified and then sent to the z-piezo actuator; this is repeated until the error signal returns to zero. For the three-dimentional movement of the sample stage to follow the sample topography accurately, the bandwidth of the feedback loop should be comparable to, or larger than, the frequency determined by the x-y scan velocity and the apparent width of the features on the surface. To increase the imaging bandwidth, all elements in the feedback loop have to be optimi...
The dynamic behaviour of myosin V molecules translocating along actin filaments has been mainly studied by optical microscopy. The processive hand-over-hand movement coupled with ATP hydrolysis was thereby demonstrated. However, the protein molecules themselves are invisible in the observations and have therefore been visualised by electron microscopy in the stationary states. Namely, the concomitant assessment of structure and dynamics has been unfeasible, a situation prevailing throughout biological research. Here, using high-speed atomic force microscopy, we directly visualise myosin V molecules walking along actin tracks. themselves. The structure of proteins has been studied by electron microscopy, x-ray crystallography, or NMR but the obtained structures are substantially static. To overcome this long-standing dilemma and enable to simultaneously record the structure and dynamics of functioning biomolecules, high-speed atomic force microscopy (HS-AFM) has been developed [2][3][4][5] . The recent significant improvement in its
A deeper mechanistic understanding of the saccharification of cellulosic biomass could enhance the efficiency of biofuels development. We report here the real-time visualization of crystalline cellulose degradation by individual cellulase enzymes through use of an advanced version of high-speed atomic force microscopy. Trichoderma reesei cellobiohydrolase I (TrCel7A) molecules were observed to slide unidirectionally along the crystalline cellulose surface but at one point exhibited collective halting analogous to a traffic jam. Changing the crystalline polymorphic form of cellulose by means of an ammonia treatment increased the apparent number of accessible lanes on the crystalline surface and consequently the number of moving cellulase molecules. Treatment of this bulky crystalline cellulose simultaneously or separately with T. reesei cellobiohydrolase II (TrCel6A) resulted in a remarkable increase in the proportion of mobile enzyme molecules on the surface. Cellulose was completely degraded by the synergistic action between the two enzymes.
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