Plants being sessile are under constant threat of multiple abiotic and biotic stresses within its natural habitat. A combined stress involving an abiotic and a biotic factor reportedly increases susceptibility of the plants to pathogens. The emerging threat, collar rot disease of chickpea (caused by Sclerotium rolfsii Sacc.) is reported to be influenced by soil moisture condition (SMC). Hence, we studied the influence of differential SMC viz. upper optimum (100%), optimum (80%), lower optimum (60%), and limiting (40%) soil moisture conditions on colonization and collar rot development over the course of infection in two chickpea cultivars, Annigeri (susceptible to collar rot) and ICCV 05530 (moderately resistant to collar rot). Disease incidence was found to be directly proportional to increase in soil moisture (R2 = 0.794). Maximum incidence was observed at 80% SMC, followed by 100 and 60% SMC. Expression of genes (qPCR analysis) associated with host cell wall binding (lectin) and degradation viz. endopolygalacturonase-2, endoglucosidase, and cellobiohydrolase during collar rot development in chickpea were relatively less at limiting soil moisture condition (40%) as compared to optimum soil moisture condition (80%). As compared to individual stress, the expression of defense response genes in chickpea seedlings were highly up-regulated in seedlings challenged with combined stress. Our qPCR results indicated that the expression of defense-related genes in chickpea during interaction with S. rolfsii at low SMC was primarily responsible for delayed disease reaction. Involvement of moisture and biotic stress-related genes in combined stress showed a tailored defense mechanism.

Dry root rot caused by the necrotrophic phytopathogenic fungus Rhizoctonia bataticola is an emerging threat to chickpea production in India. In the near future, the expected increase in average temperature and inconsistent rainfall patterns resultant of changing climatic scenarios are strongly believed to exacerbate the disease to epidemic proportions. The present study aims to quantify the collective role of temperature and soil moisture content (SMC) on disease progression in chickpea under controlled environmental conditions. In our study, we could find that both temperature and soil moisture played a decisive role in influencing the dry root rot disease scenario. As per the disease susceptibility index (DSI), a combination of high temperature (35°C) and low SMC (60%) was found to elicit the highest disease susceptibility in chickpea. High pathogen colonization was realized in chickpea root tissue at all time-points irrespective of genotype, temperature, and SMC. Interestingly, this was in contrast to the DSI where no visible symptoms were recorded in the roots or foliage during the initial time-points. For each time-point, the colonization was slightly higher at 35°C than 25°C, while the same did not vary significantly with respect to SMC. Furthermore, the differential expression study revealed the involvement of host defense-related genes like endochitinase and PR-3-type chitinase (CHI III) genes in delaying the dry root rot (DRR) disease progression in chickpea. Such genes were found to be highly active during the early stages of infection especially under low SMC.

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Ascochyta blight (AB) is a major biotic constraint to chickpea production internationally. The disease caused by the phytopathogenic fungus Ascochyta rabiei is highly favored by prolonged spells of low temperature and high humidity. The disease scenario is expected to aggravate in the near future as a result of rapidly changing climatic conditions and the emergence of fungicide-resistant pathogen strains. Tapping into host–plant resistance is the most logical way to preempt such a crisis. Presently, high levels of stable resistance against AB are yet to be identified from the chickpea gene pool. The present study was aimed at facilitating this process through multi-environment testing of chickpea genotypes. Using the GGE biplot analysis method, we could identify three genotypes, viz., ICCV 16508, ICCV 16513, and ICCV 16516, from the International Ascochyta Blight Nursery, which showed consistent moderate resistance reactions across all the tested environments. Moreover, we were able to evaluate the test locations for their suitability to support AB screening trials. Ludhiana and Palampur locations were identified as the most ideal for continual screening in the future. Controlled environment screening at the ICRISAT location offered to reduce large plant populations to small meaningful sizes through initial screening under controlled environment conditions. This study will further improve the scope of phenotyping and sources of stable resistance to be utilized in future AB resistance breeding programs.